Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_025429.1 Length=156446 Score E Sequences producing significant alignments: (Bits) Value seq35 125 7e-24 >seq35 Length=455554 Score = 125 bits (138), Expect = 7e-24 Identities = 156/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 142240 ATCTTCGGTCATCAGATGCGTTTCAATCTGGCTCAAGGCTTTCCTCTTCTCTCCACGAAG 142299 || || |||||||||||||||||||| || |||| || || || || | || || Sbjct 112212 ATTTTTGGTCATCAGATGCGTTTCAACTTGCAGGAAGGTTTCCCGCTGGTCACGACCAA- 112270 Query 142300 AAGCTGCATCTGAAG-TCGATCATCGTCGAACTCCTGTGGTTCCTCAAAGGCGATACGAA 142358 | ||||| | | | || || || ||||||||||||||||| |||||||| || || Sbjct 112271 ACGCTGCCATTTACGCTCCATTATTCATGAACTCCTGTGGTTCCTGAAAGGCGAAACTAA 112330 Query 142359 CATCAAGTATCTTCACGATCACAACGTCAAGATCTGGGATGAATGGGCTGATGCCAATGG 142418 ||| ||||| | || |||| |||| |||||||| || |||||||| | || || Sbjct 112331 CATTGCTTATCTGCGTGAAAACAATGTCAGCATCTGGGACGAGTGGGCTGACGAAAACGG 112390 Query 142419 CAACCTCGGACCTGTCTACGGCAAGCAGTGG 142449 | |||||||||| || ||||||||||| ||| Sbjct 112391 CGACCTCGGACCGGTTTACGGCAAGCAATGG 112421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500068557975840