Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_025829.1 Length=164999 Score E Sequences producing significant alignments: (Bits) Value seq828 197 1e-45 seq35 86.0 7e-12 >seq828 Length=218660 Score = 197 bits (218), Expect = 1e-45 Identities = 156/187 (83%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 65093 GCCATTACAAGCTCTCAGTAAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCA 65152 || |||||| ||| ||||| || ||||| | || ||||| ||||||||||| | ||||| Sbjct 42127 GCGATTACAGGCTTTCAGTGAAAGTACGGGTAATCACGTCACGCTGCTGTTCAGCAGTCA 42186 Query 65153 GAGAGTTAAAGCGAACTGCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCG 65212 | ||||| || || || ||||| || || ||||| || |||||||| || ||||| || | Sbjct 42187 GTGAGTTGAAACGTACCGCATAGCCAGACACACGAATAGTCAGCTGTGGGTATTTCTCAG 42246 Query 65213 GATGCTTAACTGCATCTTCCAGAGTTTCACGACGCAGAACGTTAACGTTCAGGTGTTGAC 65272 |||| ||||| ||||||||||| |||||||||||||| ||||||||||||||||| |||| Sbjct 42247 GATGTTTAACCGCATCTTCCAGTGTTTCACGACGCAGTACGTTAACGTTCAGGTGCTGAC 42306 Query 65273 CACCTTC 65279 ||||||| Sbjct 42307 CACCTTC 42313 >seq35 Length=455554 Score = 86.0 bits (94), Expect = 7e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 73885 TGGTGCTGATTGACGGAATCGAACCGCCGACCTTCTCATTACAAGTGAGTTGCTCTACCT 73944 |||||| || | ||||||||||| | ||||| || ||||||||| ||||||||||||| Sbjct 252486 TGGTGCCGACTACCGGAATCGAACTGGTGACCTACTGATTACAAGTCAGTTGCTCTACCT 252427 Query 73945 ACTGAGCTAAATCAGCA 73961 |||||||||| || ||| Sbjct 252426 ACTGAGCTAAGTCGGCA 252410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 527414608487760