Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_026014.1 Length=35814 Score E Sequences producing significant alignments: (Bits) Value seq785 93.3 1e-14 >seq785 Length=396209 Score = 93.3 bits (102), Expect = 1e-14 Identities = 266/410 (65%), Gaps = 12/410 (3%) Strand=Plus/Minus Query 22784 AACCGCATTATTGCGGAGCTGGTTATTCCTCCTGAAACGGGCGGATTCTGGATCCGGGAA 22843 ||| | |||||||| || |||| || | ||| ||||| |||||||| || || Sbjct 377997 AACTGGATTATTGCCGAAGCCATTATCCCGGCAGAAGTCGGCGGTTTCTGGATGCGTGAG 377938 Query 22844 ATTGGTGTATTTGATGAGCACGGCGATTTAATCGCGGTGGGAAATACTGCCGAAAGTTAC 22903 || || | ||| || | || || | || || || | |||| ||||| || || Sbjct 377937 ATGGGACTGTTTTCTGCAGAAGGAGAACTCATTGCCGTCAGTAATATGGCCGACAGCTAT 377878 Query 22904 AAGCCAGCCGTTGCCGAAGGGTCCGGTCGTGCACAAACATTTCGCACCATTCTGACCGTA 22963 || || | | | ||||| ||||| || ||||||| | |||| | | ||||| Sbjct 377877 AAACCCACGCTGGAGGAAGGTTCCGGCCGGACACAAACCCTGCGCATGGTGTTAACCGT- 377819 Query 22964 TCCAGCACTGCCACCGTGGCG------CTTACCGTGGATAACACCATGGTGATGGCCACA 23017 ||| | |||| ||| || ||| | || ||||| || | || || || Sbjct 377818 -----CACAGATACCGATGCGGTCAGCCTGACCATTGACGACACCCTGATTATTGCGACC 377764 Query 23018 GTGGATTACGTGGATGACAAACTGAAAGAGCATGAACAGTCACGACGTCACCCGGACGCC 23077 | || ||||| || | ||| ||| |||||| ||||| |||||||| |||| Sbjct 377763 GAAGAATACGTCAATAATCTGCTGGCAGAACATGAAGCCTCACGGCGTCACCCCGACGGT 377704 Query 23078 TCGCTGACCGCAAAAGGCTTTGTTCAACTCAGTAGCGCCACTAACAGCGTGTCTGAAACG 23137 |||||||||||||||| ||||| || || || ||||| | ||| ||| Sbjct 377703 ACGCTGACCGCAAAAGGTTTTGTGCAGCTGAGCAGCGCGGTGGATAGCACAAGCGAAGTT 377644 Query 23138 CAGGCTGCAACGCCGAAAGCAGTAAAGGCCGCGTATGATCTTGCTAACGG 23187 | ||| |||||||| ||||| || || || ||| ||||| ||| ||||| Sbjct 377643 CTGGCGGCAACGCCAAAAGCGGTGAAAGCTGCGAATGATAATGCAAACGG 377594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 114389621003008