Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq6691 114 2e-19
>seq6691
Length=42033
Score = 114 bits (126), Expect = 2e-19
Identities = 149/202 (74%), Gaps = 8/202 (4%)
Strand=Plus/Minus
Query 1456111 CCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAG--GGCCTCG 1456168
|||| |||| ||| ||||| |||||||| || |||||||| || || |||| |
Sbjct 14430 CCGTGTGTGAAGAAGAAGGCAGACTGGGCCCTGCAGTGGATCGGCAGCGACACGGCCAC- 14372
Query 1456169 ACACTTTGCCGAGCGGCTCGTCGGCTTTGCC-GCGTCGAGGGCATCTTTTTCTCGGGCAG 1456227
||| | ||||| | || | ||| || |||| || || ||||| ||||| |||||
Sbjct 14371 ---CTTCGGGGAGCGTGTGGTGGCCTTCGCTTGCGTAGAAGGAATCTTCTTCTCCGGCAG 14315
Query 1456228 TTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCA 1456287
||| | ||||||||||||| |||||||| |||||||||||||| ||| ||| ||||
Sbjct 14314 TTTTGCCTCCATCTTTTGGCTGAAGAAGCGTGGCCTCATGCCCGG-CTTGACCTTCAGCA 14256
Query 1456288 ACGAATTTATCAGTCGCGACGA 1456309
|||| || ||| || |||||
Sbjct 14255 ACGAGTTGATCTCCCGAGACGA 14234
Score = 89.7 bits (98), Expect = 7e-12
Identities = 138/192 (72%), Gaps = 5/192 (3%)
Strand=Plus/Minus
Query 1456551 AAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCGCTCATCGGCATGAAC-GCCACCGCTCAT 1456609
|||||||| ||| ||| | ||||| || || | ||||||||| || ||| | ||
Sbjct 14129 AAGAGTTTCTCACCGACGCCCTGCCCGTCAGACTACTGGGCATGAACTGCGACC--TGAT 14072
Query 1456610 GTGCCAGTACATTGAATTTTGTCGCCGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAG 1456669
|| ||||| ||||||||| || |||||||| || | | || || ||||| | |||
Sbjct 14071 GTCGCAGTATATTGAATTT-GTGGCCGACCGGCTCTTGGTGGACCTGGGCTGTGCC-AAG 14014
Query 1456670 CACTACCGGACGGCCAACCCGTTCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACC 1456729
|||||| | | ||||| ||| | ||||| ||||||| || || |||||||||
Sbjct 14013 CACTACGGATCCAAGAACCCCTTCAGCTTCATGGACATGATCTCCCTGGAAGGCAAGACC 13954
Query 1456730 AACTTTTTCGAG 1456741
||||| ||||||
Sbjct 13953 AACTTCTTCGAG 13942
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7171172034183108
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |