Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq48539 96.9 3e-15
seq8521 86.0 6e-12
seq8056 86.0 6e-12
seq4062 82.4 7e-11
>seq48539
Length=7100
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567
|||||||||| | | | ||||| || | || |||||||||||||||||| || |
Sbjct 6943 TTCCACCACGCAGACGGAGGACCAAGTGAAGGGTTGACTCCTTTTGAATGTTGTAGTCCG 6884
Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627
| ||| || | || |||| ||||| || ||||| ||||||| |||||| || | |
Sbjct 6883 AAAGGGTACGTCCATCTTCCAATTGCTTTCCTGCAAAGATCAACCTCTGCTGATCTGGGG 6824
Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCA 35687
||| | |||||||| ||||| ||| | | || | | || || | ||| |
Sbjct 6823 GAATTCCTTCCTTGTCTTGAATCTTAGCCTTAACATTTTCAATGGTATCTGAGGGTTCAA 6764
Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738
| |||| ||||| ||||| || || | || || ||||| ||||||||||
Sbjct 6763 CTTCCAAGGTGATGGTTTTGCCAGTAAGGGTCTTGACAAAAATCTGCATTC 6713
>seq8521
Length=40141
Score = 86.0 bits (94), Expect = 6e-12
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
||| || || |||||||| || | | ||| || | || ||||||||||| || || ||
Sbjct 2666 CTCTTTCTGGATGTTGTAGTCAGAAAGGGTACGTCCATCTTCCAGCTGCTTTCCGGCGAA 2607
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
||||||| |||||| || | |||| | |||||||| |||||| ||| | | |
Sbjct 2606 GATCAACCTCTGCTGATCTGGGGGAATACCTTCCTTGTCTTGGATCTTGGCCTTAACATT 2547
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | |||||| | || ||||| | ||||| || || || |||| ||| || ||
Sbjct 2546 CTCTATGGTGTCGGAGGGCTCAACCTCGAGGGTGATTGTCTTCCCAGTCAGAGTCTTGAC 2487
Query 35725 AAATATCTGCAT 35736
|| ||||||||
Sbjct 2486 GAAGATCTGCAT 2475
>seq8056
Length=34938
Score = 86.0 bits (94), Expect = 6e-12
Identities = 147/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586
||||||||| | || |||||| || || |||||||||| | ||| || | || ||
Sbjct 32112 CACCAAATGGAGGGTCGACTCCTTCTGGATATTGTAATCGGAAAGGGTGCGACCATCTTC 32053
Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646
| || || || || || || | || || || |||| ||||| | || ||||| |
Sbjct 32052 TAATTGTTTTCCAGCGAAGATAAGACGTTGTTGATCCGGAGGAATTCCTTCTTTGTCT-T 31994
Query 35647 GATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTT 35705
|| ||| || || | | || | | ||| || | || ||||||| |||||||| |
Sbjct 31993 GAATTTTCGCCTTTACATTTTCGATCGTATCTGAGGGCTCAACCTCCAATGTGATCGTCT 31934
Query 35706 TACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
| || |||||||||||||| || ||||||||
Sbjct 31933 TTCCGGTCAAAGTTTTCACGAAAATCTGCAT 31903
>seq4062
Length=67394
Score = 82.4 bits (90), Expect = 7e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 35509 TCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGC 35568
|||||| || | ||||| ||||| || | || |||||| || |||||||| || |
Sbjct 48391 TCCACCGCGAAGCCTCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGA 48332
Query 35569 CAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGG 35628
| || | | || ||||||||||| || || || |||| || ||||||||| | ||
Sbjct 48331 AAGTGTCCTGCCATCTTCCAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCTGGGGG 48272
Query 35629 AACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCAC 35688
| | ||||| || |||||| ||| | | | | | ||||| | |||||
Sbjct 48271 GATTCCTTCCTTATCTTGGATCTTGGCCTTGACATGTTCGATGGTGTCAGAAGGCTCCAC 48212
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||| | ||||| || || ||||| | || ||||| || ||||||||
Sbjct 48211 CTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCAT 48164
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450405725916720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |