Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq5 109 8e-19 >seq5 Length=447502 Score = 109 bits (120), Expect = 8e-19 Identities = 243/365 (67%), Gaps = 0/365 (0%) Strand=Plus/Plus Query 161360 CCACAGAAAGAAACAACACCTTTCTACCCACGATCTCCATATGGCGTAGCTAAACTCTAT 161419 || |||| || || || || |||||||| |||| || || | ||||| || | | | Sbjct 14310 CCGCAGAGCGAGACCACGCCATTCTACCCGAGATCCCCCTACGCTGTAGCCAAGATGTTT 14369 Query 161420 GGATATTGGATTGTAAAGAACTACAGAGAGAGTTATGGGATGCACGCCAGTAGTGGTATT 161479 | || ||||| || | |||||| ||||| ||| || || ||| || ||| || Sbjct 14370 GCTTACTGGATAGTCATAAACTACCGAGAGGCTTACGGAATCTTCGCTTCTAATGGCATC 14429 Query 161480 CTATTCAACCATGAGTCACCACGACGGGGTGAGACTTTCGTAACCCGTAAGATTACTAGG 161539 ||||||||||| || || ||| |||| || |||| |||||| ||||| || || || | Sbjct 14430 CTATTCAACCACGAATCCCCAAGACGCGGAGAGAATTTCGTGACCCGCAAAATAACCCGT 14489 Query 161540 GGACTATCCCGTATTAGTACAGGACTACAGGATTGTCTATACCTAGGTAATCTAAACTCA 161599 | | | || ||| || || ||| | | | | || || || || | Sbjct 14490 AGCGTCGCGAAAATCAGTCTCGGTCTTTTGGAATTTATGGAGCTTGGAAACCTGGATAGC 14549 Query 161600 AGACGAGATTGGGGTCATGCTGAAGACTATGTGGAGGCTATGTGGTTGATGTTACAACAG 161659 | || || ||||| ||||| ||| |||||||| || |||||| ||| | |||||| Sbjct 14550 CGCCGCGACTGGGGACATGCCAGAGATTATGTGGAAGCGATGTGGACAATGCTGCAACAG 14609 Query 161660 GAAACTCCTGATGACTATGTGATTGCCACAGGTAAAGAGTATTCAGTGAAGGACTTTGTA 161719 |||| |||| |||||||| || || || || ||| || |||| ||| || ||| Sbjct 14610 GAAAAACCTGGAGACTATGTCATAGCTACTGGGGAAGCCAGGTCCGTGAGGGAGTTCGTA 14669 Query 161720 GAGGC 161724 || || Sbjct 14670 GAAGC 14674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729301550323920