Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq742 297 3e-75 >seq742 Length=196864 Score = 297 bits (328), Expect = 3e-75 Identities = 1176/1824 (64%), Gaps = 35/1824 (2%) Strand=Plus/Minus Query 68395 GCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAA 68454 || || ||||| | | || ||||| || || |||| || | |||| || ||||| Sbjct 48891 GCAGGCTTTGTTCTCAAGTAATACATTCCAGTCTTCAAGCCCATCTTCCAGCCATAGAAG 48832 Query 68455 TGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTT 68514 || ||| || || || || | || || || | || || || | || |||||| Sbjct 48831 TGGATAGAAGTGAGCTTTCCGTAGTTGGGCTCTGCCACGTGTATGTTGAAGGACTGACTT 48772 Query 68515 TGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAA-TACTCTTTTGAGGAATTTC 68573 || || || || ||||||| || || ||||| || || | || | | ||| | |||||| Sbjct 48771 TGGTCAATAAAGGCTCCTCGGTCGGCTGCCATCTTGATCAGTATTTTGTTG-GAAATTTC 48713 Query 68574 CCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAAGGCT---CGTATTTTGAATGGA 68630 ||||| ||||| | | | | |||| | | || | || | ||||||||||| Sbjct 48712 CCAAACTGTCTTGTAGAGATCTCTGATGTGCTTGGGTATTCTGTCCAGGTTTTGAATGGA 48653 Query 68631 TCCACCATCGGATATAATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAA 68690 ||| | || || || | ||| || || || || | |||||| | ||| || || Sbjct 48652 TCCGTTGTTGGCAATGATGAGATTTTTCATGTCGTCGTCCCACAAATCAGCCTCGGTCAA 48593 Query 68691 AACTCTAAGGAGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTA 68750 | | | || ||||| |||| || | || ||||| ||||| || || || | ||||| Sbjct 48592 ATCACGCAGTAGATGGTGATTCACAACCTGGAATTCTCCAGACAAGACCCTTCTGGTGTA 48533 Query 68751 AATATTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGC 68810 || || || | ||||| | ||||| || ||||| | ||| || || || || || Sbjct 48532 GATGTTGGAAGTGAAGGGTTCAAAGGATTCGTTGTTTCCTAAAATCTGGGCGGTGGAGGC 48473 Query 68811 AGTTGGCATAGGTGCCACCAATAAACTATTTC-TAAGACCATGTGTTATGATTTTATCTT 68869 || ||||| ||||| | || | | | ||| | | || ||| | ||| ||| ||| Sbjct 48472 GGTAGGCATGGGTGCGAG-AAGCAGCGAGTTCCTGACTCCGTGTATCGCGATCTTAGCTT 48414 Query 68870 TTAGATGTTTCCAATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAA 68929 | | ||| | ||| | ||| | || | ||| | || ||||| |||| Sbjct 48413 TCAAGGCAGCCCAGTTCCACAAATCTGTAGGCTTCTTGTCCCACATCTCATATTGAAGAA 48354 Query 68930 TTCCGTTACTTGCATATGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTT 68989 | || || || || |||| || || || || | || |||| || || || | Sbjct 48353 TCCCTTTGCTGACAGGACATCCTGGGTACGTCTCGTATGTACCCTCCTTCTCGGCCAGCT 48294 Query 68990 CACAACTTGCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTT 69049 | |||||||| || | ||||||||||| | ||| || || || | | ||| ||| | Sbjct 48293 CGCAACTTGCTTCCAGAGCACCGTAATACAATGTCTCAAATATTTGTTGATTCAGAAGCT 48234 Query 69050 GTGCTTCTAGACTATCGAATGGATAATGTAA--AAGAATAAATGCATCTGCCAATCCCTG 69107 | |||| | ||| || || || ||| | | |||| ||| |||||||||| || || Sbjct 48233 GGGCTTTTTCACTCTCAAAAGGC-AATCTCATTAAGACAAAA-GCATCTGCCAGGCCTTG 48176 Query 69108 AACCCCAATACCGATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATA 69167 | ||||||||||| || | || | | | || || || ||||||||| | ||| || Sbjct 48175 TATTCCAATACCGATGGGGCGGTGACGCATGTTCGATGTTCTAGCTTCTGGTACAGGGTA 48116 Query 69168 ATAATTAATATCTATAATTTTATTAAGATTTCGGACTACTACTTTAACCACGTCCTTTAG 69227 | | |||| || |||||||| || | |||| || || ||| ||| || Sbjct 48115 AAAGTTAACGTCGATAATTTTGTTCAAATTTTTAGTGACAGTCTTGGTTACGATCTTCAG 48056 Query 69228 TTTGAGAAAATCAAATCGTCCATCTATA-ACAAACATATTCAGTGCTACAGATGCTAGAT 69286 || ||| || ||| || ||| ||||||||||| | || | ||| || | || Sbjct 48055 CTTTTCAAAGTCGAATACCTTAT-TATCTACAAACATATTGACAGCGATAGAGGCCAAAT 47997 Query 69287 TACAAACTGCTACCTCAT--TAGAATTTGCATATTGTATTATCTCTGTACATAGATTACT 69344 | || || ||||| |||| | | | || |||| | ||| ||||| || || ||||| Sbjct 47996 TGCAGACAGCTACTTCATCTTTGGAAGTG--TATTCAACTATTTCTGTGCAGAGGTTACT 47939 Query 69345 ACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAG 69404 || || ||||| ||||||||||| || || |||||| ||| || ||||||||||| || Sbjct 47938 GCACTTAATAGTTCCCAGATTTTGTTGGTTGCTCTTTCGGTTGCACGCGTCCTTGTACAG 47879 Query 69405 AATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGC 69464 || | || || || ||||| | ||||||||||| || | |||| | | || Sbjct 47878 CATGTAGGGGGTTCCCGTTTCTACTTGAGATTCGATGATGGCCATCCACAAAGTCTGCGC 47819 Query 69465 ATTTATTACGGTCTTGTAACG--CTTCTCTTTTTCATATTGTGTATATAGCCGTTCGAAT 69522 || || |||| |||| |||| || | |||||| | |||| || ||| Sbjct 47818 CTTGATCTTCTTCTTAGAACGACCTTCGGCTTCGTAGCGTGTGTACAGAGCC--TCAAAT 47761 Query 69523 TCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACA 69582 || |||||||| || | || || ||| || | || ||||| | ||| || | Sbjct 47760 TCTTCTCCCCAGCACTCGTGTAAGCCGGGAGCATCGTGGGGGCACATGA--GACTCCA-A 47704 Query 69583 TCATCAT---CCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATA-AAGAG 69638 || || | || || || ||||| || |||||||| ||||| | ||| || || | Sbjct 47703 TCCTCGTTGCTCTCGACACGCTTCATGAACAGATCGGGGATCCACA-AGCCGTAGAATAA 47645 Query 69639 ATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAAT 69698 || | | | | ||| || ||||| ||||| ||||| | || | || || | || Sbjct 47644 GTCACGTGCACGAACTTCCTCCTTTCCAGTATTCTTTTTCAAGTCTAAGAATTCAAATAT 47585 Query 69699 ATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTG 69758 || | ||||| || || | || || || | |||| || | || ||||||||||| Sbjct 47584 GTCCGCGTGCCACGGCTCAACGTAAATAGCGAAAGCTCCGGGCCTCTTGTTTCCTCCCTG 47525 Query 69759 ATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTT 69818 |||| || | ||| |||||||| || || | |||||| || | | ||||| || Sbjct 47524 GTCTACATAGCGGGCCGTGTTATTGTACACACGCAGCATGGGGACCAACCCATTGGAGAC 47465 Query 69819 ACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAAT--ATTACTAATAGATAGACCT 69876 || || || || | || || || | || || || | | || || || || Sbjct 47464 TCCGTTAGTACCCGCGATGTAGGAACCCTTGGCTCGGATGCAGT-GTACATGA-AGGCCG 47407 Query 69877 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCT 69936 || ||||| || || || | || ||||| | |||| ||||| || || || || Sbjct 47406 ATACCTCCAGCAGACTTGGAAACCAGGGCACACTGCTTCAGGGTGTCGTAGATCCCTTCA 47347 Query 69937 ATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCC 69996 || |||||||| ||||| || || || || ||||| ||| || | || | Sbjct 47346 ATACTATCATCGCTCATGGCCAGTAGGAAGCAAGAAGACAGCTGAGGACGGGGCGTGGCT 47287 Query 69997 GCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTT 70056 || |||| ||||| ||||||||||| |||| || || || || ||||| ||| Sbjct 47286 GCGGAGAATAGAGTAGGGCTGGCGTGAGTGAAGTATTTCTCTGACAGAAGGTTGTAAGTT 47227 Query 70057 TCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATGC 70116 ||||| ||||| || || || | || || || | | || | ||| | ||| || Sbjct 47226 TCAATGGCTGAATCAATGTCTTCCCCGTGGATACCGACAGATACCCTCATGAGCATGTGT 47167 Query 70117 TGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTA 70176 || |||| |||||| ||| | || |||| ||| ||||| |||| |||||| Sbjct 47166 TGCGGTCTTTCTACAACTTTCCCTTCGATCTTCAGCAGATATGAGCGCTCCAAGGTTTTA 47107 Query 70177 AACCCAAAATAGTTGTA--TGAAA 70198 || ||||| ||||| || ||||| Sbjct 47106 AATCCAAAGTAGTTATAATTGAAA 47083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686317766495760