Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_027348.2 Length=73882 Score E Sequences producing significant alignments: (Bits) Value seq35 96.9 2e-15 >seq35 Length=455554 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/225 (70%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 21316 CATCTGGGACGAATGGGCTGGTCCTGATGGCGGCCTCGGCCCGATCTATGGTGCCCAGTG 21375 |||||||||||| ||||||| | |||| |||||| ||| | || || || || Sbjct 112361 CATCTGGGACGAGTGGGCTGACGAAAACGGCGACCTCGGACCGGTTTACGGCAAGCAATG 112420 Query 21376 GCGCAGCATCCAAGGCCCC-GATGGAAAGAACATCGACCAGCTGGCCAAGGCACAAGAGC 21434 ||| || | || | || || ||| | |||||||||||||| || | || | Sbjct 112421 GCGT-GCCTGGGGTGCGGCTGACGGCAAGCAAATCGACCAGCTGGCAAATGTGGTTGAAC 112479 Query 21435 TGCTGCTGAACGACCCGGACAGCCGCCGCATCATCGTGAATGCCTGGAACGTGGCCGAGC 21494 |||| ||| ||||| ||| || || || |||||| ||| |||||||||| ||| | Sbjct 112480 AGCTGAAGAAAGACCCTGACTCGCGTCGTATTATCGTGTCTGCATGGAACGTGGGCGAAC 112539 Query 21495 TCGACCAGATGGCCCTGACACCGTGCCATGCGATGTTCCAGTTCT 21539 | || ||||||| ||| |||| ||||| || | |||||||||| Sbjct 112540 TGGATAAGATGGCGCTGGCACCTTGCCACGCTTTCTTCCAGTTCT 112584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 236099366546582