Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_027349.1 Length=166977 Score E Sequences producing significant alignments: (Bits) Value seq828 185 9e-42 seq35 86.0 7e-12 >seq828 Length=218660 Score = 185 bits (204), Expect = 9e-42 Identities = 184/237 (78%), Gaps = 1/237 (0%) Strand=Plus/Plus Query 60694 GCCATTACAAACTCTCAGTAAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCA 60753 || |||||| || ||||| || ||||| | || ||||| ||||||||||| | ||||| Sbjct 42127 GCGATTACAGGCTTTCAGTGAAAGTACGGGTAATCACGTCACGCTGCTGTTCAGCAGTCA 42186 Query 60754 GAGAGTTAAAGCGAACTGCATATCCGGATACACGGATGGTCAGCTGCGGATATTTTTCCG 60813 | ||||| || || || ||||| || || ||||| || |||||||| || ||||| || | Sbjct 42187 GTGAGTTGAAACGTACCGCATAGCCAGACACACGAATAGTCAGCTGTGGGTATTTCTCAG 42246 Query 60814 GATGCTTAACTGCATCTTCCAGAGTTTCACGACGCAGAACGTTTACGTTCAGGTGTTGAC 60873 |||| ||||| ||||||||||| |||||||||||||| ||||| ||||||||||| |||| Sbjct 42247 GATGTTTAACCGCATCTTCCAGTGTTTCACGACGCAGTACGTTAACGTTCAGGTGCTGAC 42306 Query 60874 CACCCTCAATTTTAACTGTAGGCTGTGTTTCAATTTCAATTTCACGGGCATGCAAAC 60930 |||| || | || || ||||| ||| ||| | ||||| || || ||||| Sbjct 42307 CACCTTCCACGCGCACGGTCGGCTGAACTTCCATTGGCACTTCAC-GGTATTCAAAC 42362 >seq35 Length=455554 Score = 86.0 bits (94), Expect = 7e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 69119 TGGTGCTGATTGACGGAATCGAACCGCCGACCTTCTCATTACAAGTGAGTTGCTCTACCT 69178 |||||| || | ||||||||||| | ||||| || ||||||||| ||||||||||||| Sbjct 252486 TGGTGCCGACTACCGGAATCGAACTGGTGACCTACTGATTACAAGTCAGTTGCTCTACCT 252427 Query 69179 ACTGAGCTAAATCAGCA 69195 |||||||||| || ||| Sbjct 252426 ACTGAGCTAAGTCGGCA 252410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 533738762341680