Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_027398.1 Length=38742 Score E Sequences producing significant alignments: (Bits) Value seq19589 104 6e-18 >seq19589 Length=24186 Score = 104 bits (114), Expect = 6e-18 Identities = 222/331 (67%), Gaps = 3/331 (1%) Strand=Plus/Plus Query 32213 ACAAGGACTGCTGGCAAACGCCGCTTTGGCTTTTTGATGCACTGGATATTGAGTTTGGAT 32272 |||| ||| ||||||| |||||| | | || ||| |||||| |||||||||| | Sbjct 12366 ACAAAGACCGCTGGCAGACGCCGATGGAAGTATTCACTGCGCTGGATCTTGAGTTTGGTT 12425 Query 32273 TCTGGCTGGATTCGGCAGCGAGCGACAAAAATGCTCTGTGTGCTCACTGGCTAACTGAGG 32332 | | || || | || | | || | || || || || || | | || || || | Sbjct 12426 TTTATCTTGACGCCGCTGA---CCACCAGAACGCGCTTTGCGCCCGGTACCTGACAGAAG 12482 Query 32333 CCGACGACGCGCTCAATTCTGAGTGGGTAAGCCACGGTGCAATCTGGAATAACCCACCGT 32392 |||| || ||||| | || |||| || |||| ||||||||| |||||| || | Sbjct 12483 CCGATGATGCGCTGGCCACCGAATGGGAGAGTTACGGCGCAATCTGGTGTAACCCGCCAT 12542 Query 32393 ACAGCAATATCAGGCCGTGGGTGGAAAAAGCCGCTGAGCAGTGCATACAACAGCGACAGA 32452 ||||| |||| ||||||||| || || ||||| ||||| ||| ||| ||| Sbjct 12543 ACAGCTCGATCACGCCGTGGGTTGAGAAGGCCGCCGAGCAATGCCGCGCCCAGTACCAGC 12602 Query 32453 CGGTAGTTATGCTTGTGCCAGAGGATATGTCAGTCGGATGGTTCAGCAAGGCTCTGGAGA 32512 |||| || ||||| |||| | |||| ||| || |||||| ||| ||| | Sbjct 12603 CGGTGGTAATGCTGCTGCCCGCCGATACCTCAACAGGCTGGTTCTCGCTGGCGCTGACTA 12662 Query 32513 GTGTTGACGAAGTTCGCATTATCACTGATGG 32543 | |||||| | ||| ||||||||||||| Sbjct 12663 CAGCCGACGAAATCCGCTTTATCACTGATGG 12693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123751562256832