Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_027402.1
Length=240413
Score E
Sequences producing significant alignments: (Bits) Value
seq35 114 2e-20
>seq35
Length=455554
Score = 114 bits (126), Expect = 2e-20
Identities = 192/275 (70%), Gaps = 2/275 (1%)
Strand=Plus/Plus
Query 197613 TGAAACAATATCTTGAGATGATGCAGAACATTCTGGACGAGGGTCATGTTAAAGGCGATC 197672
||||||| ||||| || | |||||||| | || || ||||| ||||| ||| |
Sbjct 112129 TGAAACAGTATCTGGATTTAATGCAGAAAGTGCTCGATGAGGGCACCCCTAAAGCCGACC 112188
Query 197673 GTACTGGAACAGGGACGCTTTCTGTCTTTGGACGCCAGATGCGTTTTGATTTGCGTAAAG 197732
|||| || || || ||| | || | ||||| | ||||||||||| | |||| |||
Sbjct 112189 GTACCGGTACGGGCACGTTGTCGATTTTTGGTCATCAGATGCGTTTCAACTTGCAGGAAG 112248
Query 197733 GTTTCCCGTTAGTCACGACTAAGAAACT-CCACCTGCGTTCTATTATCCATGAACTGCTG 197791
|||||||| | |||||||| || | || ||| | || || ||||| |||||||| |||
Sbjct 112249 GTTTCCCGCTGGTCACGACCAA-ACGCTGCCATTTACGCTCCATTATTCATGAACTCCTG 112307
Query 197792 TGGTTCCTTAGTGGGGATACCAACACCAAATATCTGGAAGATAACGGCGTTACCATTTGG 197851
|||||||| | || || || |||| |||||| || ||| || | ||| |||
Sbjct 112308 TGGTTCCTGAAAGGCGAAACTAACATTGCTTATCTGCGTGAAAACAATGTCAGCATCTGG 112367
Query 197852 CGGGAGTGGCAAGATGAAAATGGGAACCTTGGCCC 197886
|||||| || ||||| || |||| || ||
Sbjct 112368 GACGAGTGGGCTGACGAAAACGGCGACCTCGGACC 112402
Score = 109 bits (120), Expect = 8e-19
Identities = 193/279 (69%), Gaps = 2/279 (1%)
Strand=Plus/Plus
Query 198332 TCATGTCAGCTCTATCAACGCAG-TGCGGATTTTTTCCTCGGCGTGCCGTTCAACATCGC 198390
|| || ||||| || || ||| |||| || | ||||||||| |||||||||| |||||
Sbjct 112605 TCCTGCCAGCTGTACCAGCGCTCATGCG-ATATCTTCCTCGGCTTGCCGTTCAATATCGC 112663
Query 198391 GTCTTACGCATTACTCGTGCACATGGTTGCCCAGCAGGTTAACATGGTGCCGGGCGATTT 198450
|||||| | || ||||| ||| | || || || || | | ||| |||||
Sbjct 112664 CAGCTACGCACTGCTGGTGCATATGATGGCGCAACAATGCGACCTTGAAGTGGGTGATTT 112723
Query 198451 CATTTGGACGGGCGGTGACACACATCTCTACTCTAATCATCTGGAGCAGGCCAAGCTCCA 198510
| |||||||| || || || || || ||| || || |||| ||| | | || ||
Sbjct 112724 TGTCTGGACGGGTGGCGATACGCACCTGTACAGCAACCACATGGAACAGACGCATCTGCA 112783
Query 198511 GCTGACGCGTGAGCCGTTACCTTTACCGAAACTGATCATCAAGCGTAAACCGGAATCTAT 198570
|||| ||||| || | || || ||||| |||| ||||| ||||||| || |
Sbjct 112784 ACTGAGCCGTGAACCCCGTGCGTTGCCAAAACTTGTCATTAAGCGCAAACCGGCCTCCTT 112843
Query 198571 CTTCGATTATAAATTCGAAGATTTTGAGATCGTTGGGTA 198609
|| ||||| || ||||||||||| ||||| | |||||
Sbjct 112844 GTTTGATTACAACTTCGAAGATTTCGAGATTGAAGGGTA 112882
Score = 86.0 bits (94), Expect = 1e-11
Identities = 98/132 (74%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 198046 CGACCAGATCTCTAAGGTGATTGACCAGCTGCGTAACGATCCTGACAGTCGCCGTATTAT 198105
||||||| | | || ||| |||| |||||| || || |||||| || ||||||||
Sbjct 112454 CGACCAGCTGGCAAATGTGGTTGAACAGCTGAAGAAAGACCCTGACTCGCGTCGTATTAT 112513
Query 198106 TGTCAGCGCATGGAACGTGGGTGAGTTGGATCAAATGGCGTTAGCTCCGTGTCATGCGTT 198165
|| |||||||||||||| || ||||| | |||||| | || || || || || ||
Sbjct 112514 CGTGTCTGCATGGAACGTGGGCGAACTGGATAAGATGGCGCTGGCACCTTGCCACGCTTT 112573
Query 198166 CTTTCAGTTCTA 198177
||| ||||||||
Sbjct 112574 CTTCCAGTTCTA 112585
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 768531766596720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |