Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_027991.1 Length=147303 Score E Sequences producing significant alignments: (Bits) Value seq6495 255 6e-63 seq725 91.5 1e-13 >seq6495 Length=253597 Score = 255 bits (282), Expect = 6e-63 Identities = 216/263 (82%), Gaps = 2/263 (1%) Strand=Plus/Plus Query 58080 CGCTACAGCTGATTAAAGAACACGGCTGTAAAGCGGGGCTGGTATTCAACCCGGCAACGC 58139 |||| || ||||||||| || |||||||||||||| |||||||| ||||| || || Sbjct 170394 CGCTGCAACTGATTAAAAGCCATGGCTGTAAAGCGGGTCTGGTATTTAACCCTGCGACTT 170453 Query 58140 CGCTCAGTTATCTCGATTACGTCATGGACAAACTGGATGTGATCCTGCTGATGTCCGTGA 58199 |||| ||||||||||| ||||| ||||| ||||| |||||||||||||||||||| |||| Sbjct 170454 CGCTGAGTTATCTCGAGTACGTGATGGATAAACTCGATGTGATCCTGCTGATGTCGGTGA 170513 Query 58200 ACCCAGGCTTCGGCGGCCAGTCTTTTATTCCGCAGACGCTGGATAAACTGCGCGAAGTGC 58259 |||| ||||| ||||| ||||| ||||||||| ||||| ||||||||||| | |||| Sbjct 170514 ACCCGGGCTTTGGCGGTCAGTCGTTTATTCCGGGCACGCTCGATAAACTGCGTCAGGTGC 170573 Query 58260 GTCGCCGCATTGATGCGTCCGGTTACGACATTCGCCTGGAAGTGGACGGCGGCGTG-AAG 58318 || ||||||||| |||||| || ||||| |||||||| |||||||| ||| ||| Sbjct 170574 GTAAAATCATTGATGCCAGCGGTTATGATATTCGTCTGGAAGTTGACGGCGGTGTGAAAG 170633 Query 58319 GTGAACAATATCGGCGAGATCGC 58341 |||| |||||||| || ||||| Sbjct 170634 CTGAA-AATATCGGTGAAATCGC 170655 >seq725 Length=236385 Score = 91.5 bits (100), Expect = 1e-13 Identities = 68/80 (85%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 59614 AATGCACCCTTAGTTCAATTGGATAGAGCAACGGTCTTCTAAATCGTTAGTTACAGGTTC 59673 ||||| ||||||| ||| |||||||||||||||| ||||||| ||| || |||||||| Sbjct 175352 AATGCGCCCTTAGCTCAGTTGGATAGAGCAACGGCCTTCTAAGCCGTAGGTCACAGGTTC 175411 Query 59674 GAATCCTGTAGGGTGTACCA 59693 || ||||||||| |||||| Sbjct 175412 GAGCCCTGTAGGGCGTACCA 175431 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 470836131946320