Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq742 132 5e-26
seq6691 109 6e-19
>seq742
Length=196864
Score = 132 bits (146), Expect = 5e-26
Identities = 340/505 (67%), Gaps = 12/505 (2%)
Strand=Plus/Plus
Query 19188 AGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGAACAACCCGCAGA 19247
|||| | |||||| ||||| | || || || ||| ||| | ||| | || |||
Sbjct 47247 AGAAATACTTCACTCACGCCAGCCCTACTCTATTCTCCGCAGCCACGCCCCGTCCTCAGC 47306
Query 19248 TGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCATCTACGAGACGC 19307
|||| || |||||| |||| |||| ||||| || ||||| || |||||||| || |
Sbjct 47307 TGTCTTCTTGCTTCCTACTGGCCATGAGCGATGATAGTATTGAAGGGATCTACGACACCC 47366
Query 19308 TCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATCCACTGCTCGAAT- 19366
| ||| |||| || | | ||||||| | || |||||||| | || || | | |
Sbjct 47367 TGAAGCAGTGTGCCCTGGTTTCCAAGTCTGCTGGAGGTATCGGCCTTCA-TGTAC-ACTG 47424
Query 19367 -ATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCGACGGTATCGTCCC 19425
||||| | | ||| | ||| || || |||||||| || | || | |||||
Sbjct 47425 CATCCGAGCCAAGGGTTCCTACATCGCGGGTACTAACGGAGTCTCCAATGGGTTGGTCCC 47484
Query 19426 AATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGCGGCAA-ACGCA 19484
||||| || || | ||| ||||||||| | || || ||||||| || ||| | ||
Sbjct 47485 CATGCTGCGTGTGTACAATAACACGGCCCGCTATGTAGACCAGGGAGGAAACAAGAGGCC 47544
Query 19485 AGG-GCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGATTTCCTCGAA 19543
|| ||| ||||| || ||| | ||||| |||||||||||| | | || ||| | ||
Sbjct 47545 CGGAGCT--TTCGCTATTTACGTTGAGCCGTGGCACGCGGACATATTTGAATTCTTAGAC 47602
Query 19544 CTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTC-ACGGCCTTGTG 19602
|| ||| || | ||||| | || || ||| | ||| |||| ||||||
Sbjct 47603 TTGAAAAAGAATACTGGAAAGGAGGAAGTTCGTGCACGTGACTTATTCTACGG-CTTGTG 47661
Query 19603 GATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACCTGATGTGCCC 19662
||| || || || |||||| || || |||| |||| || ||| || ||||||||
Sbjct 47662 GATCCCCGATCTGTTCATGAAGCGTGTCGAGAGCAACGAGGATTGGAGTCTCATGTGCCC 47721
Query 19663 GCACGAATGC-CCTGGCCTACCCGA 19686
|||| |||| || ||| ||| |||
Sbjct 47722 CCACG-ATGCTCCCGGCTTACACGA 47745
Score = 127 bits (140), Expect = 2e-24
Identities = 462/710 (65%), Gaps = 10/710 (1%)
Strand=Plus/Minus
Query 79105 ATTTCTGTGCACAAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCG 79164
||||||||||| | ||| |||| || || || | || | ||||||||||| |
Sbjct 47958 ATTTCTGTGCAGAGGTTACTGCACTTAATAGTTCCCAGATTTTGTTGGTTGCTCTTTCGG 47899
Query 79165 TTACAGGCGTCCTTGTAGCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGA-GAAC 79223
|| || ||||||||||| |||||| || || || || || || ||| | || ||
Sbjct 47898 TTGCACGCGTCCTTGTACAGCATGTAGGGGGTTCCCGTTTCTACTTGAGATTCGATGATG 47839
Query 79224 GCCGTCCCAGATGTCCCGGGCCCGGACAACCTTCTTGTACCGACCCTGTGCGACGTA-CG 79282
||| ||| | ||| | ||| || |||||| | ||||| | || |||| ||
Sbjct 47838 GCCATCCACAAAGTCT-GCGCCTTGATCTTCTTCTTAGAACGACCTTCGGCTTCGTAGCG 47780
Query 79283 TCCGGTACAACTCGTTGAAAGCCTCCCCATAGACATCGGGCAGGCCCGG-GCACTCGTGC 79341
| | |||| | | || | || || || ||| | | ||| || ||| |||||
Sbjct 47779 TGTG-TACAGAGCCTCAAATTCTTCTCCCCAGCACTCGTGTAAGCCGGGAGCA-TCGTGG 47722
Query 79342 GGGCACATCAGGTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATC 79401
|||||||| || ||| ||||||| |||| || || |||||| || || ||||||
Sbjct 47721 GGGCACATGAGACTCCAATCCTCGTTGCTCTCGACACGCTTCATGAACAGATCGGGGATC 47662
Query 79402 CACAGGGCCGT-GAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAG 79460
|||| | |||| ||| | ||| || ||| | ||||| | || ||| ||
Sbjct 47661 CACAAG-CCGTAGAATAAGTCACGTGCACGAACTTCCTCCTTTCCAGTATTCTTTTTCAA 47603
Query 79461 CTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTT 79520
|| | || || | ||||| |||||||||||||| | || || ||||| | ||
Sbjct 47602 GTCTAAGAATTCAAATATGTCCGCGTGCCACGGCTCAACGTAAATAGCGAAAGCTCCGGG 47543
Query 79521 GCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGG 79580
| |||| || ||||||| || || ||||||||||| ||| | || || ||||||||
Sbjct 47542 CCTCTTGTTTCCTCCCTGGTCTACATAGCGGGCCGTGTTATTGTACACACGCAGCATGGG 47483
Query 79581 CACGATGCCGTCGGCGACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTT 79640
|| | || | || ||| ||||| || || ||| | ||| | || || |||
Sbjct 47482 GACCAACCCATTGGAGACTCCGTTAGTACCCGCGATGTAGGAACCCTTGGCTCGGATG-C 47424
Query 79641 CGAGCA-GTGGATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCG 79699
| | | || | ||||| || || | ||||||| | | || |||| ||| || |
Sbjct 47423 AGTGTACATGAAGGCCGATACCTCCAGCAGACTTGGAAACCAGGGCACACTGCTTCAGGG 47364
Query 79700 TCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCT 79759
| |||||||| || || || || || |||| || | |||||||| |||| ||
Sbjct 47363 TGTCGTAGATCCCTTCAATACTATCATCGCTCATGGCCAGTAGGAAGCAAGAAGACAGCT 47304
Query 79760 GTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAG 79809
| || | ||| | ||| ||| || || || | ||||| ||||||
Sbjct 47303 GAGGACGGGGCGTGGCTGCGGAGAATAGAGTAGGGCTGGCGTGAGTGAAG 47254
Score = 84.2 bits (92), Expect = 2e-11
Identities = 96/129 (74%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 20342 GCCCTCAAGGTTGAGATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATG 20401
||| | || | | ||||| || ||||| | | |||||| |||| |||| ||||||
Sbjct 48407 GCCTTGAAAGCTAAGATCGCGATACACGGAGTCAGGAACTCGCTGCTTCTCGCACCCATG 48466
Query 20402 CCGACCGCCTCGACCGCCCAGATCATGGGGAACAACGAGGCTTTCGAGCCGTACACGACC 20461
|| |||||||| ||||||||||| | || |||||||| | || || || | ||| ||
Sbjct 48467 CCTACCGCCTCCACCGCCCAGATTTTAGGAAACAACGAATCCTTTGAACCCTTCACTTCC 48526
Query 20462 AACATCTAC 20470
|||||||||
Sbjct 48527 AACATCTAC 48535
Score = 82.4 bits (90), Expect = 8e-11
Identities = 75/95 (79%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 78534 GTAGATGTTGGTCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGA 78593
||||||||||| ||| | || || || | |||||||| || | ||||||||||| ||
Sbjct 48535 GTAGATGTTGGAAGTGAAGGGTTCAAAGGATTCGTTGTTTCCTAAAATCTGGGCGGTGGA 48476
Query 78594 GGCGGTCGGCATGGGTGCGACCAGTAGAGAATTCC 78628
|||||| ||||||||||||| || || || ||||
Sbjct 48475 GGCGGTAGGCATGGGTGCGAGAAGCAGCGAGTTCC 48441
>seq6691
Length=42033
Score = 109 bits (120), Expect = 6e-19
Identities = 103/129 (80%), Gaps = 2/129 (2%)
Strand=Plus/Minus
Query 59991 GCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTG-CTATTTTCTGGCT 60049
|| || || ||||| ||||||||||||||||| ||| ||| || | || || |||||
Sbjct 14352 GCCTTCGCTTGCGTAGAAGGAATCTTCTTCTCCGGCA-GTTTTGCCTCCATCTTTTGGCT 14294
Query 60050 CAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGA 60109
|| ||||||||||||||||| ||| ||| ||| ||||||| |||| ||||| |||||
Sbjct 14293 GAAGAAGCGTGGCCTCATGCCCGGCTTGACCTTCAGCAACGAGTTGATCTCCCGAGACGA 14234
Query 60110 GGGCCTCCA 60118
||| |||||
Sbjct 14233 GGGTCTCCA 14225
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548052835548960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |