Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq48539 168 8e-37
seq8521 161 1e-34
seq4062 141 1e-28
seq8056 131 2e-25
>seq48539
Length=7100
Score = 168 bits (186), Expect = 8e-37
Identities = 174/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || ||||| |||||||| |||||||||||||| || |||||| | |
Sbjct 6487 ATGCAGATCTTCGTAAAGACCCTTACCGGAAAGACTATTACTCTAGAAGTTGAGCCTTCT 6546
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| |||| | || || || || || |||||||| ||||| |||||||| |||
Sbjct 6547 GACACAATTGAAAATGTCAAAGCCAAGATCCAAGACAAGGAAGGAATCCCTCCAGATCAG 6606
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | | || || || || ||||| | ||||||| || ||||| | ||||| |||
Sbjct 6607 CAGAGGTTGATCTTCGCAGGAAAGCAGTTGGAGGATGGACGCACCCTTTCCGACTACAAT 6666
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633
||||||| ||||| || ||||| | ||| | ||||| || ||||||
Sbjct 6667 ATCCAAAAAGAATCTACCCTTCACTTGGTCCTCCGTCTGCGTGGTGGA 6714
Score = 165 bits (182), Expect = 9e-36
Identities = 174/229 (76%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| || ||||||||||| ||||| ||||| || || || | || ||||| |
Sbjct 6714 AATGCAGATTTTTGTCAAGACCCTTACTGGCAAAACCATCACCTTGGAAGTTGAACCCTC 6773
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|||| ||||| |||| | |||||||| ||||| |||||||| |||||||| ||||| ||
Sbjct 6774 AGATACCATTGAAAATGTTAAGGCTAAGATTCAAGACAAGGAAGGAATTCCCCCAGATCA 6833
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|||| | | || ||||| || |||||| | || |||| |||||||| | ||||| ||
Sbjct 6834 GCAGAGGTTGATCTTTGCAGGAAAGCAATTGGAAGATGGACGTACCCTTTCGGACTACAA 6893
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633
| |||||||| || || ||||| | ||| | ||||| || ||||||
Sbjct 6894 CATTCAAAAGGAGTCAACCCTTCACTTGGTCCTCCGTCTGCGTGGTGGA 6942
Score = 134 bits (148), Expect = 2e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || || || || | || |||||||| || ||| | ||||| ||| |
Sbjct 6259 ATGCAGATTTTCGTGAAAACCTTGACTGGCAAGACGATAACTTTGGAGGTGGAGCCTTCC 6318
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| |||| ||| ||||||| |||||||| ||||| || || || |||||||| |||
Sbjct 6319 GATACGATTGAAAACGTGAAGGCAAAAATTCAAGACAAAGAAGGTATCCCTCCAGATCAG 6378
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | || ||||| ||||| ||||| | || || | || ||||| | || || |||
Sbjct 6379 CAGAGGCTGATTTTCGCTGGCAAGCAGTTGGAAGACGGCCGAACCCTCTCCGATTACAAT 6438
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||||||||||||||| || || | || | ||||| || || ||
Sbjct 6439 ATCCAAAAGGAATCCACCCTCCACTTGGTGCTCCGTCTCCGAGGAGG 6485
Score = 127 bits (140), Expect = 2e-24
Identities = 123/158 (78%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||||||||| |||||||| || || || || || || || || ||||||||| |
Sbjct 6942 AATGCAAATCTTCGTCAAGACTCTGACTGGTAAAACCATAACACTCGAGGTTGAGCCCTC 7001
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|||| ||||| |||| | || || || || || |||||||| || ||||| ||||| ||
Sbjct 7002 AGATACCATTGAAAATGTTAAAGCCAAGATCCAAGACAAGGAAGGTATTCCCCCAGATCA 7061
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATG 27562
|||| | | || ||||||||||||||||| || ||||
Sbjct 7062 GCAGAGGTTGATCTTTGCTGGTAAGCAACTTGAAGATG 7099
>seq8521
Length=40141
Score = 161 bits (178), Expect = 1e-34
Identities = 172/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||||||||| | ||||||||||| ||||| || |||||||| |
Sbjct 2247 ATGCAGATCTTTGTCAAGACTTTGACCGGCAAGACCATTACACTGGAGGTTGAACCCTCG 2306
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| || |||| ||| | ||||| ||||| ||||||||||| || || || ||||| |||
Sbjct 2307 GACAGTATTGAGAATGTCAAGGCCAAAATCCAGGACAAGGAAGGTATCCCCCCAGATCAG 2366
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | | || ||||| || ||||| || || |||| || || || | ||||| ||
Sbjct 2367 CAGAGGTTGATCTTTGCCGGAAAGCAGCTTGAAGATGGCCGCACTCTCTCCGACTACAAC 2426
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| ||||| || ||||| ||| | ||||| || |||||
Sbjct 2427 ATCCAGAAGGAGTCCACACTCCATCTTGTCCTACGTCTGCGTGGTGG 2473
Score = 152 bits (168), Expect = 6e-32
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || || ||||| |||||||||||||| || || || ||||||||| | |
Sbjct 2019 ATGCAGATTTTCGTGAAGACCCTTACCGGCAAGACAATCACCCTAGAGGTTGAGCCCTCT 2078
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| ||| |||| || || || ||||| ||||| || || || ||||| |||
Sbjct 2079 GACACAATTGAGAATGTGAAAGCCAAGATCCAGGATAAGGAAGGTATCCCCCCAGATCAG 2138
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | | || || || || ||||| || || |||| |||||||| | ||||||||
Sbjct 2139 CAGAGGTTGATCTTCGCCGGAAAGCAGCTGGAAGATGGACGTACCCTCTCTGACTATAAC 2198
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| || ||||| ||||||||||| | ||| | ||||| || |||||
Sbjct 2199 ATTCAGAAGGAGTCCACTCTTCACTTGGTCCTCCGTCTCCGTGGTGG 2245
Score = 145 bits (160), Expect = 9e-30
Identities = 169/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||||||||| || || ||||| ||||| || || || ||||||||| |
Sbjct 2703 ATGCAGATCTTTGTCAAAACCCTGACCGGGAAGACCATCACCCTAGAGGTTGAGCCCTCA 2762
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| ||| |||| || || || ||||| ||||| || || || ||||| |||
Sbjct 2763 GACACAATTGAGAATGTGAAAGCCAAGATCCAGGATAAGGAAGGTATCCCCCCAGATCAG 2822
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | | || ||||| || |||||| | || |||| |||||||| | ||||| ||
Sbjct 2823 CAGAGGTTGATCTTTGCAGGAAAGCAATTGGAAGATGGACGTACCCTTTCCGACTACAAC 2882
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633
||||||| || || || ||||| | ||| | ||||| || ||||||
Sbjct 2883 ATCCAAAAAGAGTCGACCCTTCACTTGGTCCTCCGTCTGCGTGGTGGA 2930
Score = 122 bits (134), Expect = 1e-22
Identities = 124/162 (77%), Gaps = 0/162 (0%)
Strand=Plus/Plus
Query 27471 CATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCG 27530
||||| |||| | || || || || || |||||||| || ||||| ||||| |||||| |
Sbjct 1856 CATTGAAAATGTTAAAGCCAAGATCCAAGACAAGGAAGGTATTCCCCCAGATCAGCAGAG 1915
Query 27531 TCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCA 27590
| || ||||||||||||||||| || |||| ||||||||| | ||||| || | ||
Sbjct 1916 GTTGATCTTTGCTGGTAAGCAACTTGAAGATGGTCGTACCCTCTCTGACTACAACATTCA 1975
Query 27591 AAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||||||| || ||||| | ||| | ||||| || || ||
Sbjct 1976 GAAGGAATCTACCCTTCACTTGGTCCTCCGTCTCCGAGGAGG 2017
>seq4062
Length=67394
Score = 141 bits (156), Expect = 1e-28
Identities = 170/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462
|| ||||| ||||| || ||||| || || ||||||||||| || || ||||| ||| |
Sbjct 48161 ATCATGCAGATCTTCGTGAAGACCCTCACGGGCAAGACTATCACCCTCGAGGTGGAGCCT 48220
Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522
||| | ||| | | || | ||||| || || || || ||||| ||||| || ||||||
Sbjct 48221 TCTGACACCATCGAACATGTCAAGGCCAAGATCCAAGATAAGGAAGGAATCCCCCCAGAC 48280
Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582
|||||| | || || || || || ||||| || || |||| | || || | |||||
Sbjct 48281 CAGCAGAGGCTGATCTTCGCCGGCAAGCAGCTGGAAGATGGCAGGACACTTTCGGACTAC 48340
Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633
|| |||| ||||| ||||| || || || || || | ||||||||||||
Sbjct 48341 AACATCCAGAAGGAGTCCACCCTCCACCTGGTGCTGAGGCTTCGCGGTGGA 48391
>seq8056
Length=34938
Score = 131 bits (144), Expect = 2e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462
|| ||||| || || || || || | ||||| ||||| || || | ||||||||| |
Sbjct 31900 ATCATGCAGATTTTCGTGAAAACTTTGACCGGAAAGACGATCACATTGGAGGTTGAGCCC 31959
Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522
|||| || | |||| | ||||| |||||||| ||||| || ||||||||||| ||
Sbjct 31960 TCAGATACGATCGAAAATGTAAAGGCGAAAATTCAAGACAAAGAAGGAATTCCTCCGGAT 32019
Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582
|| || ||||| || || ||||| || ||| | || |||| ||| ||||| | || ||
Sbjct 32020 CAACAACGTCTTATCTTCGCTGGAAAACAATTAGAAGATGGTCGCACCCTTTCCGATTAC 32079
Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
||| |||| ||||| || || || ||| | || | ||||| || || ||
Sbjct 32080 AATATCCAGAAGGAGTCGACCCTCCATTTGGTGCTCCGTCTCCGAGGAGG 32129
Score = 89.7 bits (98), Expect = 6e-13
Identities = 93/122 (76%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| |||||||| | || ||||||||||| ||||| || || ||| |
Sbjct 32359 ATGCAGATCTTCGTCAAGACCTTGACTGGCAAGACTATCACTCTCGAAGTGGAGCCCTCC 32418
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| ||| | |||||||| ||||| || ||||| || || || ||||| |||
Sbjct 32419 GACACCATTGAGAATGTCAAGGCTAAGATTCAAGATAAGGAAGGTATCCCACCAGATCAG 32478
Query 27526 CA 27527
||
Sbjct 32479 CA 32480
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 569819690674080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |