Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_028449.1
Length=63569
Score E
Sequences producing significant alignments: (Bits) Value
seq785 114 5e-21
seq19589 111 6e-20
>seq785
Length=396209
Score = 114 bits (126), Expect = 5e-21
Identities = 89/102 (87%), Gaps = 3/102 (3%)
Strand=Plus/Minus
Query 27102 TACCGTTATTATCCTGCGCC-CGGCCCTTTAGCTCAGT-GGTGAGAGCGAGCGACTCATA 27159
|||||| || |||| || || ||||||||||||||||| ||| ||||| ||||||||||
Sbjct 187992 TACCGT-ATAATCCCGCACCTCGGCCCTTTAGCTCAGTTGGTTAGAGCACGCGACTCATA 187934
Query 27160 ATCGCCAGGTCGCTGGTTCAAATCCAGCAAGGGCCACCATAT 27201
||||| |||||||||||||| ||||||||||||||||| ||
Sbjct 187933 ATCGCTTGGTCGCTGGTTCAAGTCCAGCAAGGGCCACCAAAT 187892
>seq19589
Length=24186
Score = 111 bits (122), Expect = 6e-20
Identities = 295/449 (66%), Gaps = 4/449 (1%)
Strand=Plus/Plus
Query 32101 ATCCTCGACCAGTTTCTGGATGAAAAGGAAGGTAACCACACCACGGCATACCGTGATGGT 32160
||||||| || ||||| ||||||||||||||||| ||||| || | |||||
Sbjct 19197 ATCCTCGGACAATTTCTTGATGAAAAGGAAGGTAATAGTCTGACGGCTTATCAGGATGGC 19256
Query 32161 GCGGGTATCTGGACCATCTGCCGTGGAGCCACCCGGGTGGATGGTAAGCCTGTGATTCCT 32220
| ||| |||||||| || ||||| || | ||||| | ||||| ||||| || |
Sbjct 19257 GTGGGGATCTGGACAATTTGCCGCGGCGTTACCCGCATTGATGGGCGCCCTGT--TTACA 19314
Query 32221 --GGCATGAAGCTGTCGAAGGAAAAATGCGACCGGGTTAACGCTATCGAACGGGATAAGG 32278
||||||| || | || || |||| || ||| | ||| ||||||
Sbjct 19315 AAGGCATGACATTGACTGCGGCGAAGTGCGCAGATGTGAACAAATTGGAATCCAATAAGG 19374
Query 32279 CGCTGGCATGGGTGGAGCGTAATATAAAAGTTCCACTGACCGAGCCACAAAAAGCAGGTA 32338
|| | | ||||| | |||| | | || | ||||| |||| |||| || ||||
Sbjct 19375 CGATAGAGTGGGTTAAAACTAATGTCACTGTCACGCTGACTCAGCCGCAAATTGCCGGTA 19434
Query 32339 TCGCGTCATTTTGCCCCTATAACATTGGCCCCGGTAAGTGTTTCCCGTCGACGTTTTATA 32398
|||| |||||||||||||| |||||||| || | || || ||| | || ||||| || |
Sbjct 19435 TCGCATCATTTTGCCCCTACAACATTGGACCGGCGAAATGCTTCACTTCAACGTTCTACA 19494
Query 32399 AGCGGCTTAATGCAGGCGATCGCAGGGGAGCGTGTGAGGCGATTCGCTGGTGGATTAAGG 32458
| || ||||| || ||| | || || |||| | || ||||| | |
Sbjct 19495 AAAAACTAAATGCCGGAGATAAACGTGGTGCCTGTGCTGAAATAAAGCGGTGGGTACGCG 19554
Query 32459 ACGGTGGCAGAGACTGCCGTATCCGTTCAAACAACTGTTACGGTCAGGTATCAAGACGTG 32518
| | ||| | ||||||| | ||| ||| || || | || ||||| | | ||||
Sbjct 19555 ATGATGGGAAAGACTGCAATGCCCGGGAAAATAATTGCTTTGGGCAGGTGATACGCCGTG 19614
Query 32519 ACCAGGAGAGTGCGCTGGCATGCTGGGGT 32547
| ||||| || | || |||||||||||
Sbjct 19615 ATCAGGAAAGCGAACTAACATGCTGGGGT 19643
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 203125452063220
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |