Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_028672.1 Length=149732 Score E Sequences producing significant alignments: (Bits) Value seq9405 156 4e-33 >seq9405 Length=40329 Score = 156 bits (172), Expect = 4e-33 Identities = 183/245 (75%), Gaps = 2/245 (1%) Strand=Plus/Minus Query 24464 TCTGGTACTTCAGGTTGCTGATGAAGATGTGCTTCTCGTGATCCGGCAGATTCATGTAG- 24522 ||||||| ||||| ||||| | ||||||||| || ||||||||||||| | | || | Sbjct 35877 TCTGGTATTTCAGATTGCTCAGGAAGATGTGTTTTTCGTGATCCGGCA-ACGCCTGAAAA 35819 Query 24523 TCGATACGGTCACGGGTCACGTTAACTTCTTCCGGACGCCAGAAGAACGCCAGTTGCTTC 24582 ||||||||||| |||| || | || |||||||||||||||||||| | ||| ||||| Sbjct 35818 TCGATACGGTCGCGGGAAACATCAATCTCTTCCGGACGCCAGAAGAAGGACAGCTGCTTT 35759 Query 24583 TCGATCAGCTTCTCGAACTTGGCGTGTTTCTGCTGGTCATAGCGAGAAACGTTCGGTGTC 24642 |||||||| || || || | | || ||||||||||| | || | |||||| | | Sbjct 35758 TCGATCAGTTTTTCAAAGATTTCATGCTTCTGCTGGTCGAAACGGGCAACGTTAACCGAC 35699 Query 24643 TCGCCGAGGAACATCGGCTGAGTCAGGAAATCGAATTTGTTCTGGTTGAAAGTGCTGTAA 24702 | ||| | |||||| |||| | || |||| ||| |||||| ||||| |||||| Sbjct 35698 TGGCCAAAGAACATTGGCTCAAGAAGCTGATCGTTTTTATTCTGGGAAAAAGTACTGTAA 35639 Query 24703 GACAT 24707 | ||| Sbjct 35638 GCCAT 35634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478602244034880