Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_028685.1 Length=62851 Score E Sequences producing significant alignments: (Bits) Value seq725 167 9e-37 >seq725 Length=236385 Score = 167 bits (184), Expect = 9e-37 Identities = 340/495 (69%), Gaps = 20/495 (4%) Strand=Plus/Plus Query 30132 GTTCTGGCGCTG--ATTGCCGCAGGGGCTTCTGCGCCTGAAATCCTGGATCAGTTTCTGG 30189 || ||||||||| |||| | || || ||||| || | || || ||||| || |||| Sbjct 192989 GTGCTGGCGCTGGTATTG--GGTGGCGCATCTGCCCCGGCTATTCTCGATCAATTGCTGG 193046 Query 30190 ATGAAAAAGAAGGTAACCACACCACGGCATACCGTGATAGTGCGGGTATCTGGACCATCT 30249 |||| |||||||||||| | || || || | ||| || | || | ||||| || | Sbjct 193047 ATGAGAAAGAAGGTAACAGCCTGACTGCCTATCAAGATGGTACCGGCCTTTGGACGATTT 193106 Query 30250 GCCGTGGAGCCACCCGGGTGGATGGTAAGCCTGTTATTCCTGGCATGAAGCTGTCGAAGG 30309 ||||||| || | ||| || || |||||||| || | || |||| |||| | | Sbjct 193107 GCCGTGGCGCAATCCGTGTCGACGGTAAGCCGGTCTATAAAGGTATGAGGCTGACCGCTG 193166 Query 30310 AAAAATGCGACCGGGTTAA-CGCCATTGAGCGTGATAAGGCGCTGGCATGGGTGGAGAAA 30368 || |||| | ||| || || | | ||| | |||||| | || |||||| || || Sbjct 193167 CGAAGTGCGCGCAGGTGAATCGGC-TGGAGTCAAACAAGGCGATTGCCTGGGTGAAGGAA 193225 Query 30369 AACATCAAAGTGCCACTGACTGAACCCCAGAAAGCGGGGATCGCGTCATTCTGCCCGTAT 30428 ||| |||| || ||||| || | || |||| || || ||||| || |||||||| || Sbjct 193226 AACGTCAACGTTCCACTTACGCAGCCTCAGATTGCTGGCATCGCCTCGTTCTGCCCCTAC 193285 Query 30429 AACATTGGCCCCGGTAAGTGTTTCCCGTCGACGTTTTATAAACGAA---TTAATGCAGGC 30485 ||||| |||||| || ||||| | || || || | | |||| | || || ||| Sbjct 193286 AACATCGGCCCCTCGAAATGTTTTTCATCCACTTTCT---ACCGAAAGCTCAACGCTGGC 193342 Query 30486 GAT---CGCCG-GGGTGCATGCGAGGCGATTCGCTGGTGGATTAAAGACGGTGGCAGAGA 30541 ||| ||| | | ||||| ||||| | |||||| | | |||||||| | ||| Sbjct 193343 GATAAGCGCGGCGCGTGCA-GCGAGATAAAGCGCTGGGTGCGT---GACGGTGGTAAAGA 193398 Query 30542 CTGCCGTATCCGCTCAAATAACTGTTATGGTCAGGTATCCCGTCGCGACCAGGAGAGTGC 30601 |||| | |||| ||||||| || ||| ||||| || ||||| ||||| || | Sbjct 193399 CTGCAATGTCCGGGCAAATAATTGCCTTGGGCAGGTGATACGCCGCGATCAGGAAAGCGA 193458 Query 30602 GCTGGCGTGCTGGGG 30616 |||| |||||||||| Sbjct 193459 GCTGACGTGCTGGGG 193473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200829779552888