Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_028686.1 Length=166313 Score E Sequences producing significant alignments: (Bits) Value seq828 188 8e-43 >seq828 Length=218660 Score = 188 bits (208), Expect = 8e-43 Identities = 169/212 (80%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 48813 TCTGTGAAAGTACGAGCGATAACGTCGCGCTGCTGTTCCGACGTCAGGGAGTTGAAGCGT 48872 || ||||||||||| | || ||||| ||||||||||| | ||||| |||||||| ||| Sbjct 42141 TCAGTGAAAGTACGGGTAATCACGTCACGCTGCTGTTCAGCAGTCAGTGAGTTGAAACGT 42200 Query 48873 ACCGCGTAGCCGGAAACACGAATGGTCAGCTGCGGATATTTTTCCGGATGCTCAACCGCG 48932 ||||| ||||| || |||||||| |||||||| || ||||| || ||||| | |||||| Sbjct 42201 ACCGCATAGCCAGACACACGAATAGTCAGCTGTGGGTATTTCTCAGGATGTTTAACCGCA 42260 Query 48933 TCCAGCAGAGTTTCACGACGCAGCACGTTAACGTTCAGGTGCTGACCGCCTTCAATTTTT 48992 || ||| |||||||||||||| ||||||||||||||||||||||| ||||| | Sbjct 42261 TCTTCCAGTGTTTCACGACGCAGTACGTTAACGTTCAGGTGCTGACCACCTTCCACGCGC 42320 Query 48993 ACCGTTGGCTGGTATTCAATTTCTACTTCACG 49024 || || ||||| ||| ||| |||||||| Sbjct 42321 ACGGTCGGCTGAACTTCCATTGGCACTTCACG 42352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531615790572720