Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_028701.2
Length=33509
Score E
Sequences producing significant alignments: (Bits) Value
seq785 316 4e-82
seq14927 304 3e-78
seq6495 80.6 6e-11
>seq785
Length=396209
Score = 316 bits (350), Expect = 4e-82
Identities = 968/1480 (65%), Gaps = 30/1480 (2%)
Strand=Plus/Minus
Query 9848 ACGCGCATTACCATGGACACGCCGGAAGTGGTCTGCACCAACAAGCTGATCACCGCCACG 9907
|| ||||| || |||||||||||||||| || ||||| | |||||||| ||||| |
Sbjct 380197 ACCCGCATCACGCTGGACACGCCGGAAGTAGTTTGCACAAGCAAGCTGACCACCGGATCC 380138
Query 9908 CTGGAAGTGCAAAACGGCGGGGAAATGAAGGGCAACATTACCCATTCAGGCGGATCGCTT 9967
|| |||||| || | || || ||| |||||| | | |||| ||||| ||
Sbjct 380137 CTTGAAGTGAAACAAGGTGGCACGCTGACCGGCAACTTAATCCATAGCGGCGGCAGCCTG 380078
Query 9968 TCGTCTAATGGTGTCGTTGTCCATTCGCACAAACATAGCGGCGTTCAGTCCGGTGGCAGT 10027
| || || || ||||||| ||| | || || ||||| |||||| |||||||| ||
Sbjct 380077 ACATCCAACGGCATCGTTGTGCATACCCATCGCCACAGCGGTGTTCAGACCGGTGGCGGT 380018
Query 10028 AATACAGGTGGCCCGGTATGAGTACAGTCCGTTACAGC--GGCATGAATGCCGGTTCAGG 10085
| ||||| |||||| ||||| || |||| | | | || ||| | | ||
Sbjct 380017 CAGACAGGAGGCCCGCAATGAG--CAATCCGAAATACCTGGGGATGGACAGAAATAGCGG 379960
Query 10086 CCATGCCATCACCGACAACGAGCATATAGCGCAGTCTATCGGCGATATTCTGTTAACGCC 10145
| || ||| || ||| ||||| ||||| || |||||||| || |||||
Sbjct 379959 TCTGGCTATCGAAGATCTCGACCATATTCGCCAGTCCGTCAGCGATATTTTGAATACGCC 379900
Query 10146 GATCGGTTCCCGTGTAATGCGCCGTGCTTACGGTTCGCAGCTTTTCAACCTGATAGATCA 10205
| | || || | || ||||||||| |||||| |||| ||| | | ||||| |||||
Sbjct 379899 GGTGGGCTCAAGAGTGATGCGCCGTAATTACGGCTCGCTGCTGTCGGAGCTGATTGATCA 379840
Query 10206 GCCGGTCGATAACGCCATAACGAAGCTGCGCGTTATGTCTGCCATCTACAGCGCCCTGTA 10265
|||| | |||| | || ||| | | ||| | | |||| ||||||||
Sbjct 379839 GCCGCAAAACGGCGCCCTG-CG--GCTACAGATGATGGCCGTGTGTTACACCGCCCTGTT 379783
Query 10266 TTTATGGGAACCGCGTATCTCTCTGACCAGTATCACCCT-GAGCGCGCCGGGTGC--CGG 10322
|||||||| || | || ||||| |||||| | || | |||| | | |||
Sbjct 379782 GCAGTGGGAACCCCGCGTTTCACTGACTGCTATCACTTTTGA---CACCGGCTACGACGG 379726
Query 10323 TCGGCTGGT--TGCCACTATCCAGGCCAACCGCACCGACAATCAGACGCCATTTAACGCC 10380
| |||| | ||| || | | ||| | ||| | |||| |||| | |
Sbjct 379725 CAAGATGGTGATTGAACTGACCGGA--AGCCGTAACGATACGGCGACGG-ATTTTTCCCT 379669
Query 10381 GA-TATTACATTGAGGGGCCAGGCATGAGCGGCACGATCGATTTATCGCAGTTACCGCCG 10439
|| |||| | |||| | || ||| | ||||||||||| ||||||||| |
Sbjct 379668 GAATATTCCTGTGAGCTGACACTTATG---GCAACGATCGATTTGAGCCAGTTACCGGCC 379612
Query 10440 CCCGTGGTGGTAGAACCGCTGGACTTCGAAACGCTTTTCGCGCAGCGCAAGGCCGCATTT 10499
|||| ||||| |||| ||||| | ||||| || | | | || || | | |
Sbjct 379611 CCCGATGTGGTCGAACAACTGGATTATGAAACCCTGCTTGAAGAACGTAAAACGACGCTG 379552
Query 10500 ATTGCGATGTACCCGGAAGACGAGCAGGAAGAGATCGCCCGCACGCTTGAGCTTGAATCG 10559
||| || | || || | ||| ||||||||| ||| ||| || || ||| |||||
Sbjct 379551 ATTTCGCTTTATCCCGCCGACCAGCAGGAAGCCATCAGCCGGACACTGACGCTGGAATCC 379492
Query 10560 GAGCCGATCACCATGCTGCTGGAAGAGAATTGCTATCGCGAATTGCTGTTGCGCCAGCGG 10619
|| ||| | || |||| || | ||||| || |||||| || | ||||||||||
Sbjct 379491 GAACCGCTGGTCAAGCTGTTGCAGGAGAACGCTTACCGCGAACTGATCCTGCGCCAGCGA 379432
Query 10620 GTGAATGAAGCGGCCCGCGCGGTGATGCTGGCTTATTCCACGGATAGCGATCTGGATAAT 10679
|| || ||| | ||||||||||| ||| |||| ||| | |||| |||||||||||| |
Sbjct 379431 GTTAACGAATCCGCCCGCGCGGTAATGGTGGCGTATGCGACGGGAAGCGATCTGGATCAG 379372
Query 10680 CTGGCGGTCAATTTCAA---CGTTGAACGTCTGACCATTCAGGAAGAAGACGACAGCGTT 10736
||||||| || ||| ||| |||| ||| | | | || ||| |
Sbjct 379371 CTGGCGGCGAA---CAATGGCGTACAACGACTGGTGCTGACGCCTGCTGATAACACCAAA 379315
Query 10737 ACTCCGCCAATTGAAGCCGTGGTGGAGTCAGACGCGGATTTACGCACGCGTACCCAGCAG 10796
||||||| | | || || |||| || || ||||| ||||| || | | ||||
Sbjct 379314 GTTCCGCCAGTCGCCGCTGTCATGGAAAGTGATGCAGATTTCCGCACCCGAATTCCGCAG 379255
Query 10797 GCTTTTGAAGGTCTGAGCGTGGCCGGGCCAACGGCGGCGTATGAGTTTTGGGGGCGTTCG 10856
|| |||||||| ||||||| ||||| || | | | | || ||||| || ||
Sbjct 379254 GCCTTTGAAGGAATGAGCGTTGCCGGTCCGTCCGGGTCATACGAGTTCCACGGTTTGTCT 379195
Query 10857 GCTGACGGGCGCGTAGCTGATATTTCGGCGGTCAGTCCTACGCCTGCCTGCGTCACCATT 10916
|| || || || || || || || |||| |||| || | || || |||||||||
Sbjct 379194 GCCGATGGCCGGGTGGCGGACATCTCGGTTATCAGCCCGTCTCCAGCGAATGTCACCATT 379135
Query 10917 TCGGTGCTGTCGCGCGAGGGTGACGGAACGGCCAGCGATGATCTGCTTTCCGTTGTCGCT 10976
|| || ||||| || || | || || | || || || ||| | | || |
Sbjct 379134 TCTGTACTGTCACGTGAAGCCGATGGTATCGCTCCGGAAGACCTGTTAACGAAAGTTCGT 379075
Query 10977 GCCGCCCTGAACGATGAAGAGGTGCGCCCGGTGGCCGACAGGGTAACGGTGCAGTCTGCG 11036
||| |||||||| ||| | || || || || |||||| | || ||| ||||||||
Sbjct 379074 ATCGCGCTGAACGACGAAAATGTCCGGCCTGTTGCCGACCGTGTTCTGGTTCAGTCTGCC 379015
Query 11037 GACATTGTGCCGTACCAGATTGATGCAACGCTTTACATCTATCCGGGGCCGGAAGCTGAA 11096
| | || || || |||||||||| ||||| ||| | | ||||||||| || |||||
Sbjct 379014 AGCGTCGTCCCCTATGAGATTGATGCCACGCTCTACCTGTTTCCGGGGCCTGAGTCTGAA 378955
Query 11097 CCCGTCCGGCAGGCATCGGAGCAGCAGTTACAGGCGTATATTACCGCGCAGAATCGCTTA 11156
|| || | |||| | || | |||| | | ||||| | || ||| |||| |
Sbjct 378954 CCTATCACCCTGGCAGCCGAAGAAAAGTTGAAATCTTATATCAGCGATCAGCATCGTCTG 378895
Query 11157 GGGCGCGATATCCGTATTTCTGCTATCTACGCCGCCCTGCACGTCGAAGGCGTCCAGCGC 11216
|| ||||||||||| |||| || ||||| || || ||||| |||||||| ||||||||
Sbjct 378894 GGACGCGATATCCGGCTTTCGGCCATCTATGCGGCGCTGCATGTCGAAGGTGTCCAGCGT 378835
Query 11217 GTTGAACTGGCGCAGCCTGTTGCGGATATCGTGCT-GAGTGACTACCAGGCATCGCACTG 11275
|| || || || | || | || || || ||||| || | | || || || ||||
Sbjct 378834 GTGGAGCTTGCTAAACCGGCCGCTGACATTGTGCTCGACAG-CACACAAGCCTCTTACTG 378776
Query 11276 CACCGAATACACCATAACGGTGGGTGGTTACGATGAGTAA 11315
||| | ||| || || ||||| || | ||||||||||
Sbjct 378775 CACAAATTACGTGATTACAGTGGGAGGCTCCGATGAGTAA 378736
Score = 122 bits (134), Expect = 2e-23
Identities = 406/620 (65%), Gaps = 19/620 (3%)
Strand=Plus/Plus
Query 19363 TCCACCGCAACCGAACCAGGCATACCACCCGCCTGATAGTCTTCGAtttttttGGTGAGT 19422
|||||||| |||||||| ||| || || | |||||| || | ||| |||||||
Sbjct 374693 TCCACCGCGACCGAACCGCTCATGCCGCCGCCACGATAGTTTTGCAGTTTGCGGGTGAGT 374752
Query 19423 TTGGCGGGGGTGATTTCCGGAACCATGCCGAAGTAGTTATCCCCGTCAAAGAACATATTG 19482
|| | | || | | |||| |||| |||| | | ||||||| |||| ||
Sbjct 374753 TTCGGCAGCGTCAGCGAAGAGACCAGACCGAGGTAGCTGTTCCCGTCATTAAACAGGTTC 374812
Query 19483 AAATATTTGAGTTTCTTAGGCAGTGCCATAAGC----GCCCCCGGTTAGTTGTTCACTG- 19537
| ||||| | ||||||||| |||||||| || | | || |||| |||| | |
Sbjct 374813 AGGTATTTCAATTTCTTAGGAAGTGCCATGAGTCATTGTCTCC--TTAGCTGTTAATGGA 374870
Query 19538 CGCTGGAAAACGTAGCGAAGTAGGTATCAGTAA-ACGTCTGGATCAGGCTGAGATTTTCC 19596
||| || ||| | | | ||| | || || | ||| |||| |||| | |||| ||||
Sbjct 374871 CGC-GGCAAAGTTCACCAGGTAAGAGTCGGTGATACG-CTGGCGCAGGGTCAGATCTTCC 374928
Query 19597 AGCGGTGGAACCGGCGTATAGTCGTAATTAATGGTCAGTTGACCATTGCGCAGGTTTTCC 19656
|| || |||||||| || |||||||||| || ||||| || |||| |||||
Sbjct 374929 AGTGGAGGAACCGGGGTGTAGTCGTAATCGATATACAGTTTGCCGGCTTTCAGGGTTTCC 374988
Query 19657 GTGGTGTT--CGGTTCAGGGTCGTACCAGCAGCGGGCGCCCAGCAGTTTGCCTTCCG-TC 19713
| ||||| ||||| | |||||||||||| || | | | | || | | |
Sbjct 374989 GCTGTGTTTGCGGTTTCG--TCGTACCAGCAGTCACCGTCAATGATGTAACCCGCTGATT 375046
Query 19714 ACATAAGCGGTCAGCTTCTTGTTGATGCCGTCCACGATGTCCTTAACCAGCGACGGGGTA 19773
||| || || || ||||||||||| | ||||| |||||| || || ||
Sbjct 375047 TCAT-TTCGCGCATTTTGGCTTTGATGCCGTCGATCATGTCGCGAACCAGTGAGGGCGTC 375105
Query 19774 AGCGGTTTATCAACATAGTAGAAGTGGGCTTCAGCGACGGTATCAGCAACGATCTGCGCG 19833
| |||||||| || | | || |||||||| | |||||| || | | ||||||
Sbjct 375106 ATTGGTTTATCGACCGCCCACATATGCGCTTCAGCCATGGTATCGGCCAGCACTTGCGCG 375165
Query 19834 GTTCGGGTATAACTTTCGAA---GATGTACGTTTCCTTGTCGCAGGTACGCGATCCCCAG 19890
|| ||||| || |||| || || |||| || | | ||||||||| ||||||
Sbjct 375166 GTACGGGTGTAGTTTTCAAACAGGAACAACGTGTCATCGCTGCAGGTACGGTTGCCCCAG 375225
Query 19891 ATGCGGTAGCCGTCCTGCTTGATCAGCGTGGTAACGCCTGCCGCATTCAGTTCGTCAGCG 19950
| ||| ||||||| | | ||||||||| || | || | ||||| || |||
Sbjct 375226 AAACGGAAGCCGTCTTTGCGAACCAGCGTGGTGACACAGGCTTCGTTCAGCAGATCGGCG 375285
Query 19951 TCGGTATCGGTGCCCTGCAA 19970
|| || |||| |||||||
Sbjct 375286 TCAGTGCCGGTCGCCTGCAA 375305
>seq14927
Length=58641
Score = 304 bits (336), Expect = 3e-78
Identities = 840/1273 (66%), Gaps = 40/1273 (3%)
Strand=Plus/Minus
Query 9848 ACGCGCATTACCATGGACACGCCGGAAGTGGTCTGCACCAACAAGCTGATCACCGCCACG 9907
|| ||||| || | ||||||||||||||||||||||||||||| || | ||||| |||
Sbjct 35347 ACCCGCATCACGCTCGACACGCCGGAAGTGGTCTGCACCAACAAACTCACCACCGGCACT 35288
Query 9908 CTGGAAGTGCAAAACGGCGGGGAAATGAAGGGCAACATTACCCATTCAGGCGGATCGCTT 9967
| ||| | || | ||||| | |||| ||||| | ||||| ||||| ||
Sbjct 35287 ATCGAAATTAAACAGGGCGGCAAGATGACCGGCAATCTCACCCACAGTGGCGGCAGCCTC 35228
Query 9968 TCGTCTAATGGTGTCGTTGTCCATTCGCACAAACATAGCGGCGTTCAGTCCGGTGGCAGT 10027
|||| || || || ||||| || | || ||||| || ||||| ||| | || ||| ||
Sbjct 35227 ACGTCAAACGGGGTTGTTGTGCACACCCATAAACACAGTGGCGTCCAGACGGGCGGCGGT 35168
Query 10028 AATAC--AGGTGGCCCGGTATGAGTACAGTCCGTTACAGCGGCATGAATGCCGGTTCAGG 10085
| || ||||| || |||| || | |||| |||| || | || | ||
Sbjct 35167 CAGACGCAGGTG--CCTTCATGACTAACGCGAAATACATCGGCCTGGCTCGCGACACGGG 35110
Query 10086 CCATGCCATCACCGACAACGAGCATATAGCGCAGTCTATCGGCGATATTCTGTTAACGCC 10145
| | || ||| | ||||| |||||| | |||| |||||| |||||
Sbjct 35109 GCGCAGCGTCGAAGACCTGGCACATATTCAGCAGTCGGTAAGCGACATTCTGCGCACGCC 35050
Query 10146 GATCGGTTCCCGTGTAATGCGCCGTGCTTACGGTTCGCAGCTTTTCAACCTGATAGATCA 10205
|||||||||| || |||||||||| ||| ||||| ||| | | |||| || |
Sbjct 35049 CGTCGGTTCCCGCGTCATGCGCCGTGATTATGGTTCATTGCTGTCTGAACTGACTGACC- 34991
Query 10206 GCCGGTCGATAACGCCATAACGAAGCTGCGCGTTATGTCTGCCATCTACAGCGC---CCT 10262
||| | || || | || |||| | ||| | ||| |||||||| |||
Sbjct 34990 GCCCGCAGAATGCGGCGCTGCGC--CTGCAAATCATGGCGGCCTGTTACAGCGCAATCCT 34933
Query 10263 GTATTTATGGGAACCGCGTATCTCTCTGACCAGTATCACCCTGAGCGCGCCGGGTGCCGG 10322
| |||||| || || || |||||| | |||||| | || || | |||
Sbjct 34932 CAA---ATGGGAGCCACGCGTCAGCCTGACCGGCATCACCTTTGAAACGACGTTCGACGG 34876
Query 10323 TC--GGCTGGTTGCCACTATCCAGGCCAACCGCACCGACAA-TCAGACGCCATTT----A 10375
||| | || ||| || | || ||| | |||| || | |||||||| |
Sbjct 34875 AAAAGGCGTGGTGGAACTCACCGG--CACCCGTAAAGACACCTCCGCCGCCATTTCCTTA 34818
Query 10376 ACGCCGATATTACATTGAGGGGCCAGGCATGAGCGGCACGATCGATTTATCGCAGTTACC 10435
|| | | | |||| | || | | || ||||| | ||||||||
Sbjct 34817 ACCC-----TACCCGTGAGCTGA-----ATTATGGCAACTATCGACCTGAGCCAGTTACC 34768
Query 10436 GCCGCCCGTGGTGGTAGAACCGCTGGACTTCGAAACGCTTTTCGCGCAGCGCAAGGCCGC 10495
| |||| ||||| || |||||| | ||||| || | ||| |||| || ||| |
Sbjct 34767 CGCCCCCGACGTGGTGGAGGTGCTGGATTACGAAATCCTCCTGGCGGAGCGTAAAGCCAC 34708
Query 10496 ATTTATTGCGATGTACCCGGAAGACGAGCAGGAAGAGATCGCCCGCACGCTTGAGCTTGA 10555
| | || ||||||| |||||| |||||| | |||||||||||||| ||| ||
Sbjct 34707 GCTGGTATCGCTGTACCCCGAAGACCAGCAGGCCGCCATCGCCCGCACGCTGACGCTGGA 34648
Query 10556 ATCGGAGCCGATCACCATGCTGCTGGAAGAGAATTGCTATCGCGAATTGCTGTTGCGCCA 10615
|| |||||||| | | ||||||| ||||| ||| |||||| || | | || ||
Sbjct 34647 GTCTGAGCCGATTGTTAAGTTGCTGGAGGAGAACGCCTACCGCGAAGTGATCCTTCGTCA 34588
Query 10616 GCGGGTGAATGAAGCGGCCCGCGCGGTGATGCTGGCTTATTCCACGGATAGCGATCTGGA 10675
|||||| ||||||||||| | |||||||||||||||||| |||| | | || |||||
Sbjct 34587 GCGGGTTAATGAAGCGGCGCAGGCGGTGATGCTGGCTTATGCCACCGGAACAGACCTGGA 34528
Query 10676 TAATCTGGCGGTCAATTTCAACGTTGAACGTCTGACCATTCAGG---AAGAAGAC-GACA 10731
||| | || | || |||| ||| ||||| ||||| | ||| | | | || | ||
Sbjct 34527 CAATATCGCCGCCACGTTCAGCGTGGAACGCCTGACGA-TCACGCCTGCGGATACGGTCA 34469
Query 10732 GCGTTACTCCGCCAATTGAAGCCGTGGTGGAGTCAGACGCGGATTTACGCACGCGTACCC 10791
|||| ||||| | | || || |||| || || ||||| || | ||| | |
Sbjct 34468 GCGT--GCCCGCC-GTGGCGGCAGTCATGGAAAGCGATGCTGATTTGCGTATCCGTGCGC 34412
Query 10792 AGCAGGCTTTTGAAGGTCTGAGCGTGGCCGGGCCAACGGCGGCGTATGAGTTTTGGGGGC 10851
||||||| |||||||| |||||||| ||||| || | | ||||||| | ||||
Sbjct 34411 AGCAGGCGTTTGAAGGGCTGAGCGTAGCCGGTCCGGTTGGTTCCTATGAGTATCACGGGC 34352
Query 10852 GTTCGGCTGACGGGCGCGTAGCTGATATTTCGGCGGTCAGTCCTACGCCTGCCTGCGTCA 10911
| || ||||||||||| || || |||||||||| | ||||||| ||||||||||||| |
Sbjct 34351 GCTCTGCTGACGGGCGGGTGGCGGATATTTCGGTGATCAGTCCGTCGCCTGCCTGCGTGA 34292
Query 10912 CCATTTCGGTGCTGTCGCGCGAGGGTGACGGAACGGCCAGCGATGATCTGCTTTCCGTTG 10971
| ||||| |||||| | | || |||| || || || || ||||| | |
Sbjct 34291 CGATTTCCGTGCTGGCACAGACCGGCAACGGCACTGCGCCCGCCGACCTGCTGGCGAAAG 34232
Query 10972 TCGCTGCCGCCCTGAACGATGAAGAGGTGCGCCCGGTGGCCGACAGGGTAACGGTGCAGT 11031
| ||||| || || |||||| | |||||||| ||||| ||| | || || || ||||
Sbjct 34231 TACAGGCCGCGCTCAATGATGAAAACGTGCGCCCCGTGGCTGACCGCGTGACCGTCCAGT 34172
Query 11032 CTGCGGACATTGTGCCGTACCAGATTGATGCAACGCTTTACATCTATCCGGGGCCGGAAG 11091
|||| | | || ||| |||||||| ||| || | | || || |||||||
Sbjct 34171 CTGCCACCGTGGTCAGTTACACCATTGATGCCGTGCTGTATCTGTTCCCTGGTCCGGAAG 34112
Query 11092 CTGAACCCGTCCG 11104
| |||||| ||||
Sbjct 34111 CCGAACCCATCCG 34099
Score = 203 bits (224), Expect = 7e-48
Identities = 881/1373 (64%), Gaps = 64/1373 (5%)
Strand=Plus/Plus
Query 19283 CGCCCCATTTTTTCAGCAATCCGG--CATCCAGACCGCCAAGCGTGATATCCATATCCAG 19340
||||||| | |||||||| || | ||||||| ||||| | ||| || | |||
Sbjct 28262 CGCCCCACTGTTTCAGCA--CCAGTTCATCCAGCCCGCCCACCGTCCACTCAAAGGTCAG 28319
Query 19341 AGCGCCAGCGTCGAAGCCCAGATCCACCGCAACCGAACCAGGCATACCACCCGCCTGATA 19400
||| || |||| | ||| | ||| | || ||||||| | ||| || || | ||||
Sbjct 28320 CGCGTCATCGTCCAGGCCAAAATCAATCGAGGCCGAACCGGTCATGCCGCCGCCGCGATA 28379
Query 19401 GTCTTCGAtttttttGGTGAGTTTGGCGGGGGTGATTTCCGGAACCATGCCGAAGTAGTT 19460
|| || | || ||||||||| | | || | | ||| |||||| |||| |
Sbjct 28380 GTTCTCCAGCTTGCGGGTGAGTTTCGGCAGCGTCAGCGCGCTGACCGTGCCGAGGTAGCT 28439
Query 19461 ATCCCCGTCAAAGAACATATTGAAATATTTGAGTTTCTTAGGCAGTGCCATA----AGCG 19516
| |||||| |||| || | ||||| |||||||||||||||||||| ||||
Sbjct 28440 GTTCCCGTCGTTAAACAGGTTCAGGTATTTCAGTTTCTTAGGCAGTGCCATGTTTTAGCG 28499
Query 19517 CCCCCGGTTAGTTGTTCACTGCGCTGGAAAACGTAGCGAAGTAGGTATCAGTAAACGTCT 19576
|| | |||| |||| || | | ||| ||||| || | ||| ||| || | ||
Sbjct 28500 CCTC---TTAGCTGTTAACGGAGGTGGCGAACGTCGCCAGGTACTGATCGGTGATGCGCT 28556
Query 19577 GGATCAGGCTGAGATTTTCCAGCGGTGGAACCGGCGTATAGTCGTAATTAATGGTCAG-T 19635
| |||| | | || ||||||||| || |||||||||||||| |||| |||| ||| |
Sbjct 28557 GACGCAGGGTTAAATCTTCCAGCGGCGGCACCGGCGTATAGTCATAATCAATGAACAGCT 28616
Query 19636 TGACCATTGCGCAGGTTTTCCGTGGTGTTCGGTTCAGGGTCGTACCAGCAGCGGGCGCCC 19695
|| || | |||| | || |||||||| ||| |||||||||||||| | ||
Sbjct 28617 TGCCCGCT-TTCAGGGTGTCGACGGTGTTCGCTTCGGGGTCGTACCAGCA----GGTACC 28671
Query 19696 AGCAGTTTGCCTTCCGTCACAT----AAGCGGTCAGCTTCTTGTTGATGCCGTCCACGAT 19751
| || | | ||| || || || |||||| ||| ||||| | | ||
Sbjct 28672 ATCAATGATCAGACCGGCAGATTTCATTTCGCGCAGCTTGGCGTTAATGCCCGCAATCAT 28731
Query 19752 GTCCTTAACCAGCGACGGGGTAAGCGGTTTATCAACATAG--TAGAAGTGGGCTTCAGCG 19809
||| || | |||| |||||| | || | || ||| | | | ||| ||||| ||
Sbjct 28732 GTCTTTGATAAGCGTCGGGGTCATTGGCCTGTC--CATCGCCCACAGGTGCGCTTCTGCC 28789
Query 19810 ACGGTATCAGCAACGATCTGCGCGGTTCGGGTATAACTTTCGAAGATGTA---CGTTTCC 19866
| ||| || || | | ||||||||| |||||||| | || || | | | || ||
Sbjct 28790 ATGGTGTCCGCCAGCACCTGCGCGGTGCGGGTATAGTTCTCAAACAGGAACAGCGGATCA 28849
Query 19867 TTGTCGCAGGTACGCGATCCCCAGATGCGGTAGCCGTCCTGCTTGATCAGCGTGGTAACG 19926
| |||||| ||| ||||||| ||||||| | ||| |||||||| |||
Sbjct 28850 TCAGAGCAGGTGCGCTGCCCCCAGAACTTAAAGCCGTCTTTGCGGATAAGCGTGGTCACG 28909
Query 19927 CCTGCCGCATTCAGTTCGTCAGCGTCGGTATCGGTGCCCTGCAACGTGAAATAGATGTCC 19986
| ||| ||||| ||| || ||||| ||||| |||||| | || | |
Sbjct 28910 CACGCCTGGTTCAGCAGGTCGGCATCGGTGCCGGTGGTCTGCAAATCCCAGTACACGCTG 28969
Query 19987 CGATCCATCCCAAGCACGTTATTAACGGGCACGTTGGAAATGGTTTTATGCCAGCCCTGC 20046
| || || ||| || | ||||| |||| ||||||||||||||
Sbjct 28970 GCAGACAGGCCGGTGACGCCGTTGATCCCAACGTTCGAAAGCGTTTTATGCCAGCCGGTT 29029
Query 20047 GTTGCGTCGATTCTGGCGCGCATCCCAACAGCATGAGCGCCTACGGGCACGGTGGCATTG 20106
|||||||||| |||| |||| || | || | |||| ||||| || | | ||
Sbjct 29030 TCTGCGTCGATTTTGGCACGCAGGCCGAGCGCGTAAGCGGTGGCGGGCGCGATATCGCTG 29089
Query 20107 GCCCCAGCGTTGGTGTCGTAGCAGATGAAATTAGGCCAGATGACCATCATTTCACGCTG- 20165
|| | | |||||| || | | ||||| |||||||| ||||||| ||||||||
Sbjct 29090 GCATTGGTGGTGGTGTTCCAGGACACGAAATCAGGCCAGACAACCATCAGCTCACGCTGG 29149
Query 20166 -TGCAAACTGTTCGCGGTAGGTCTTCGCTTCGGCAATCGTATTGCAGCCGTTCGCGGCTA 20224
|| ||| || |||||||| | | || |||| | || |||||||||| |||| |
Sbjct 29150 CTG-AAATTG-TCGCGGTACTTGATGGCATCGGACACGGTTTTGCAGCCGTACGCGCTGA 29207
Query 20225 CATATGCGAACGCGCGCAGTTTTTCCGCAATGACACCGAGTTGTGCGGCTACTGCTTTCG 20284
| || | || ||||| || | | | | | |||| | || ||| | |
Sbjct 29208 CGTAGCCAAAGGCGCGGAGCTGCTGACAGACGGCGGCGAGCGCCGTAGCGACTTCCTGAT 29267
Query 20285 TATCAAGTCCGGGAACAGCCAGGACGCGCGGGCGTACGCCTACGCGCA-TTTCGGCAGAC 20343
||||||| || || || | || | |||||| |||||| | | || ||| ||||||
Sbjct 29268 TATCAAGCCCCGGCACGCCGAGAATGCGCGGCTTTACGCCGA-GTTCAGTTTGCGCAGAC 29326
Query 20344 AGCAGCGCGTACATGCCGGTAAAGCGCCCGTTTGCATCGGTGCCGCCAATGACCAGTTGA 20403
||||| || | |||||||||| | ||| || | || | ||||| ||||
Sbjct 29327 AGCAGGGCTTTCATGCCGGTATACATGCCGGTTTCGTCCGAACCGCCGATGA-------- 29378
Query 20404 TCCTGTGTCGGAGTGGTGT-CGCCTTCTGGCGGAACAATTTTTGACGCATCGGCAACGCG 20462
||| | | ||||| | ||| | ||| ||| || | || || |||||
Sbjct 29379 ---TGT-TTGAGGTGGTTTGCGC-----GTCGG-------TTTCAC-CCTCTGCGACGCG 29421
Query 20463 GATCACAATGGTTTGCGGGCTGGTCTGGTCTGAAATCGCTTTCAGGGTGGTATACAGGGT 20522
| || | | ||| | | ||||| | || || |||||| || || ||
Sbjct 29422 AACAACGACGACAACCGGTTTAGCCTGGTTGGCGATTGCCATCAGGGAGGCGCGGAGCGT 29481
Query 20523 GCCGGTTTTGCCTGCCTTGCC--CAGCATGTTAGCCACGCGGGTGATCAATACAGGTGTA 20580
||||||||| || |||||||| | || || || ||| |||||| | || || |||
Sbjct 29482 GCCGGTTTTACCCGCCTTGCCTGCGGC-GGTCAG-TACGTTGGTGATAAGCACCGGCGTA 29539
Query 20581 TCCAGCGGGAACGCTGTTTCGTCCGCATCATCAGCGGTGCAGACAACGCCGAT 20633
|| ||||||||||| |||||||||| || ||||||||||| | |||||
Sbjct 29540 TCGAGCGGGAACGCGTCGGCGTCCGCATCTTCTGCGGTGCAGACCATCCCGAT 29592
Score = 129 bits (142), Expect = 1e-25
Identities = 291/429 (68%), Gaps = 20/429 (5%)
Strand=Plus/Minus
Query 2148 TTATTGAACTGATCGCCAGTCCAGAAAGGATAGGCTTCATGTTCTTCACTG--GAAGGCG 2205
|| |||||| | || || | |||||| ||||| || | || | ||| || || || |
Sbjct 43372 TTGTTGAACAGTTCTCCTGACCAGAACGGATACGCGCCGTG--CGTCAGTGCTGACGGGG 43315
Query 2206 TCGAAAAGTAGGTGCGGCGCAGTCCTTTTTGTGTCGCCATGCCTGCGGCCACTGAGCGCA 2265
| || || |||||| |||||| || || | ||||||||| ||| || |||||
Sbjct 43314 TGGAGAAATAGGTGGTGCGCAGATGTTCCTGCGACGCCATGCCGCTGGCAACCTTGCGCA 43255
Query 2266 GTTTGATGAAATTACTGATCCAGAAGGCTTCATCCAGGTACAGATCGCCGGTGTAGCTCT 2325
| || |||||| |||||| ||| ||| |||| |||||| ||||| | | ||| |
Sbjct 43254 GCTTCTGGAAATTCGGGATCCAAAAGATTTCGTCCACGTACAGGTCGCCATTATGGCTTT 43195
Query 2326 GGGCCGTCGCGGCGGAGGTGCCGA-GAAAATACAGGATCGCACCGTTGCTT---AACTCA 2381
|||| || || | |||||| | |||||| ||| | || |||||| | | | ||
Sbjct 43194 GGGCGGTGTTGGAGTTGGTGCCTAAGAAAAT-CAGCTTTGCGCCGTTGTTGCCGATCACA 43136
Query 2382 ATGGCATCACCGCCCTTAAGTTCTACTCCTATTTCCCTTGCCAGCTT-CTGAATGA---A 2437
|| | ||||| | | || || || | | ||| || || |||||||| |
Sbjct 43135 ATCGGGTCACC---CGTCAGCTCAACATCAA----CCTGGCGGGCAAACTGAATGATGTA 43083
Query 2438 TCGCTTGAACTGGAACGCCTGGGCGCGGCTGGCTGACAGGAATATCTGGTTATTTCCGGT 2497
| ||| | | ||||| | |||||||||||||| |||||||||| |||||
Sbjct 43082 TTCACGAAACACGTAAGCCTGAGTTTTACTGGCTGACAGGAAAATCTGGTTATGGCCGGT 43023
Query 2498 TTCCAGCGCACGCAACAGCGCTTCGCGGGCAAAGTACCAAGTGGCACCAATTTGGCGCGA 2557
| || || |||| ||| ||||||||||||||| | | || || || ||||| |||||
Sbjct 43022 CGCTAGGGCGCGCAGCAGAGCTTCGCGGGCAAAGAAGAACGTCGCGCCGATTTGTCGCGA 42963
Query 2558 TTTGAGGAT 2566
|||||| ||
Sbjct 42962 TTTGAGAAT 42954
Score = 86.0 bits (94), Expect = 1e-12
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 23914 ACCGCCTCTTGTTTCTTCTCAAATCGCCTACGAATGCGTTTTCCGTTACGTCCGCGCGGC 23973
|| || || |||||||| || || | || | ||| |||||||| || || ||||
Sbjct 55226 ACTGCTTCATGTTTCTTGTCGAACATACGCCGGAAGCGCTTTCCGTTGCGCCCCTGCGGT 55167
Query 23974 CATACGTCTACTTCATATTGACCACCTTCGAGCTTCTTAATCGACATAAGAAAGCCCTCC 24033
| | ||| |||||||| ||||| | ||||||||||||||||||||| |||||||||
Sbjct 55166 CTGATGTCCACTTCATAACGACCATCATCGAGCTTCTTAATCGACATATTGAAGCCCTCC 55107
Query 24034 GG 24035
||
Sbjct 55106 GG 55105
>seq6495
Length=253597
Score = 80.6 bits (88), Expect = 6e-11
Identities = 102/138 (74%), Gaps = 2/138 (1%)
Strand=Plus/Plus
Query 26912 TTTCTCTATCTGAACCGCCATTGTTATAACGGTGTTTGCCGTTACAGCGAGAAGACCGGC 26971
|| |||||||| |||||||||||||| |||||| | |||||||||| || |||
Sbjct 169558 TTCCTCTATCTCAACCGCCATTGTTACAACGGTCTGTGCCGTTACA-ATCTCAGTGGGGC 169616
Query 26972 -TTTAACGTGCCTTTTGGCAAGTATAAGAACGTCTACTTTCCTGAAAATGAAATCCGCTT 27030
|||||||||||||| ||| ||||| || || || || ||| | ||| || ||
Sbjct 169617 ATTTAACGTGCCTTTCGGCCGTTATAAAAAGCCGTATTTCCCGGAAGAAGAACTCTACTG 169676
Query 27031 GTTTGCCGAAAAGGCCAA 27048
|||||| ||||| || ||
Sbjct 169677 GTTTGCTGAAAAAGCAAA 169694
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 107019650173068
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |