Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_028760.1
Length=49037
Score E
Sequences producing significant alignments: (Bits) Value
seq725 102 3e-17
seq9360 84.2 7e-12
>seq725
Length=236385
Score = 102 bits (112), Expect = 3e-17
Identities = 167/234 (71%), Gaps = 5/234 (2%)
Strand=Plus/Plus
Query 25897 GTTCCGAGCAACT-ACGACCCTGTTAACAGGACATATGCCGGAACGTGGGACGGAACTTT 25955
||||||| ||||| |||||||||| | | || | ||| |||| || ||||| ||||| ||
Sbjct 215407 GTTCCGA-CAACTTACGACCCTGTCACCCGGTCTTATTCCGGCACTTGGGATGGAACGTT 215465
Query 25956 CAAATGGGCGTGGAGCAACAACCCGGCCTGGGTTCTTTACGACCTGATCATGAATCAGCG 26015
||||||||||||| | | |||||| | ||| || | || ||| | || ||||| | ||
Sbjct 215466 TAAATGGGCGTGGACCGATAACCCGTCGTGGATTTTCTATGACATCGTCGTGAATAACCG 215525
Query 26016 TTATGGGTTAGACCAGC-GCGAGTTAGGGATCCCGGTCGACAAGTGGTCGCTCTATGAGG 26074
| ||| | | ||||| || | || | |||| |||||| ||| || |
Sbjct 215526 CTTTGGTCTCGGCCAGCGGCTCACTGCTGA-CAATATCGATAAGTGGGAGCTTTACCGCG 215584
Query 26075 TGTCGCAATACTGTGATGAGCTTGTGCCGGACAATCGCGGCGGGA-TGGAACCG 26127
| |||||||||||||| | | ||||||||| ||||| || | ||||||||
Sbjct 215585 TCTCGCAATACTGTGACCAAATGGTGCCGGACGGCCGCGGGGGAAGTGGAACCG 215638
>seq9360
Length=49093
Score = 84.2 bits (92), Expect = 7e-12
Identities = 111/152 (73%), Gaps = 4/152 (3%)
Strand=Plus/Minus
Query 22194 GGCGGCTATACTGGCAACGGTGGCAAGTACGAACCTAAAGGCGTTGTGCATGGCGGCGAA 22253
||||||||||| || |||| |||||||| || ||| || ||||| || | || |||
Sbjct 34900 GGCGGCTATACCGGGCACGGCGGCAAGTATGAGCCTGCCGGTGTTGTTCACCGTGGAGAA 34841
Query 22254 TTCGTCTTTACCAAAGAGGCGACCAGCCGATTAGGGCCGGAA--AATTTATACAGGCTGA 22311
|| || || || ||||| | ||||||||| | || | || ||| | || | ||||
Sbjct 34840 TTTGTTTTCACAAAAGAATCAACCAGCCGAATCGGT--GTAACTAATCTCTATCGTCTGA 34783
Query 22312 TGCGTGGCTATGCTTCCGGCGGTCTGGTAGGC 22343
|||| || ||||| | ||||||||||| |||
Sbjct 34782 TGCGCGGTTATGCCACGGGCGGTCTGGTGGGC 34751
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 156668633707692
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |