Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_028760.1 Length=49037 Score E Sequences producing significant alignments: (Bits) Value seq725 102 3e-17 seq9360 84.2 7e-12 >seq725 Length=236385 Score = 102 bits (112), Expect = 3e-17 Identities = 167/234 (71%), Gaps = 5/234 (2%) Strand=Plus/Plus Query 25897 GTTCCGAGCAACT-ACGACCCTGTTAACAGGACATATGCCGGAACGTGGGACGGAACTTT 25955 ||||||| ||||| |||||||||| | | || | ||| |||| || ||||| ||||| || Sbjct 215407 GTTCCGA-CAACTTACGACCCTGTCACCCGGTCTTATTCCGGCACTTGGGATGGAACGTT 215465 Query 25956 CAAATGGGCGTGGAGCAACAACCCGGCCTGGGTTCTTTACGACCTGATCATGAATCAGCG 26015 ||||||||||||| | | |||||| | ||| || | || ||| | || ||||| | || Sbjct 215466 TAAATGGGCGTGGACCGATAACCCGTCGTGGATTTTCTATGACATCGTCGTGAATAACCG 215525 Query 26016 TTATGGGTTAGACCAGC-GCGAGTTAGGGATCCCGGTCGACAAGTGGTCGCTCTATGAGG 26074 | ||| | | ||||| || | || | |||| |||||| ||| || | Sbjct 215526 CTTTGGTCTCGGCCAGCGGCTCACTGCTGA-CAATATCGATAAGTGGGAGCTTTACCGCG 215584 Query 26075 TGTCGCAATACTGTGATGAGCTTGTGCCGGACAATCGCGGCGGGA-TGGAACCG 26127 | |||||||||||||| | | ||||||||| ||||| || | |||||||| Sbjct 215585 TCTCGCAATACTGTGACCAAATGGTGCCGGACGGCCGCGGGGGAAGTGGAACCG 215638 >seq9360 Length=49093 Score = 84.2 bits (92), Expect = 7e-12 Identities = 111/152 (73%), Gaps = 4/152 (3%) Strand=Plus/Minus Query 22194 GGCGGCTATACTGGCAACGGTGGCAAGTACGAACCTAAAGGCGTTGTGCATGGCGGCGAA 22253 ||||||||||| || |||| |||||||| || ||| || ||||| || | || ||| Sbjct 34900 GGCGGCTATACCGGGCACGGCGGCAAGTATGAGCCTGCCGGTGTTGTTCACCGTGGAGAA 34841 Query 22254 TTCGTCTTTACCAAAGAGGCGACCAGCCGATTAGGGCCGGAA--AATTTATACAGGCTGA 22311 || || || || ||||| | ||||||||| | || | || ||| | || | |||| Sbjct 34840 TTTGTTTTCACAAAAGAATCAACCAGCCGAATCGGT--GTAACTAATCTCTATCGTCTGA 34783 Query 22312 TGCGTGGCTATGCTTCCGGCGGTCTGGTAGGC 22343 |||| || ||||| | ||||||||||| ||| Sbjct 34782 TGCGCGGTTATGCCACGGGCGGTCTGGTGGGC 34751 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156668633707692