Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_028773.1 Length=182145 Score E Sequences producing significant alignments: (Bits) Value seq828 132 6e-26 seq9405 87.8 2e-12 >seq828 Length=218660 Score = 132 bits (146), Expect = 6e-26 Identities = 147/196 (75%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 125477 GTTCGCATTGAAGGCGGTCAGCATCTTAATGTCAATGTTCTGAATCGTGAAACGCTTCAA 125536 || ||| | ||||| |||||||| || || || || || ||| ||||||||| || || Sbjct 42322 GTGCGCGTGGAAGGTGGTCAGCACCTGAACGTTAACGTACTGCGTCGTGAAACACTGGAA 42263 Query 125537 GATGCAGTAAAACATCCTGAAAAATATCCTCAACTGACCATTCGTGTTTCTGGTTATGCA 125596 ||||| || ||||||||||| ||||| || || ||||| |||||||| ||||| ||||| Sbjct 42262 GATGCGGTTAAACATCCTGAGAAATACCCACAGCTGACTATTCGTGTGTCTGGCTATGCG 42203 Query 125597 GTTCGTTTTAATGCATTGACTCGCGAACAGCAGTTGGACGTTATCAATCGCACGTTTACG 125656 || ||||| || || ||||| ||||||||| ||||| || | || || || || Sbjct 42202 GTACGTTTCAACTCACTGACTGCTGAACAGCAGCGTGACGTGATTACCCGTACTTTCACT 42143 Query 125657 GAAGCTATGTAATGGC 125672 ||| |||||| || Sbjct 42142 GAAAGCCTGTAATCGC 42127 >seq9405 Length=40329 Score = 87.8 bits (96), Expect = 2e-12 Identities = 120/168 (71%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 20065 TTGCGCGTTACGATACCCAGAAACATGAAATGTTCGAAAACTTAATTGAAAAGCAGTTGA 20124 |||| |||| ||| ||||| |||||||| || ||||| | || ||||||||| || Sbjct 35710 TTGCCCGTTTCGACCAGCAGAAGCATGAAATCTTTGAAAAACTGATCGAAAAGCAGCTGT 35769 Query 20125 GTTTCTTCTGGCGTCCTGAAGAGGTTGACGTAACTCGTGATAAGATCGATTATGATAATT 20184 |||||||||||||| |||||| |||| || | || || ||||||| | | | Sbjct 35770 CCTTCTTCTGGCGTCCGGAAGAGATTGATGTTTCCCGCGACCGTATCGATTTTCAGGCGT 35829 Query 20185 TACCAGAACATGAAAAACATATCTTTACTTCCAATTTGAAGTATCAGA 20232 | || || || |||||||| ||||| |||| |||| || |||| Sbjct 35830 TGCCGGATCACGAAAAACACATCTTCCTGAGCAATCTGAAATACCAGA 35877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582234599377200