Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_028780.1 Length=167124 Score E Sequences producing significant alignments: (Bits) Value seq828 188 8e-43 >seq828 Length=218660 Score = 188 bits (208), Expect = 8e-43 Identities = 154/187 (82%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 101919 GAAGGTGGTCAACACCTGAACGTTAACGTTTTGCGTCGTGAAACTCTGGAAGATGCAGTT 101978 ||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||| ||| Sbjct 42313 GAAGGTGGTCAGCACCTGAACGTTAACGTACTGCGTCGTGAAACACTGGAAGATGCGGTT 42254 Query 101979 AAGCATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCCGGTTATGCAGTTCGCTTT 102038 || ||||| || ||||| || |||||||| || ||||| || || ||||| || || || Sbjct 42253 AAACATCCTGAGAAATACCCACAGCTGACTATTCGTGTGTCTGGCTATGCGGTACGTTTC 42194 Query 102039 AACTCTCTGACTCCGGAACAGCAGCGCGACGTTATCGCTCGTACCTTCACCGAGAGTTTG 102098 ||||| |||||| | ||||||||||| ||||| || | ||||| ||||| || || || Sbjct 42193 AACTCACTGACTGCTGAACAGCAGCGTGACGTGATTACCCGTACTTTCACTGAAAGCCTG 42134 Query 102099 TAATGGC 102105 |||| || Sbjct 42133 TAATCGC 42127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 534208757597760