Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_028829.1
Length=248088
Score E
Sequences producing significant alignments: (Bits) Value
seq785 159 5e-34
>seq785
Length=396209
Score = 159 bits (176), Expect = 5e-34
Identities = 524/806 (65%), Gaps = 24/806 (3%)
Strand=Plus/Plus
Query 125865 GCTTCAATAGCAATACGCGGGATATTGATTGAGACGACGCCTAAGTTATTACGACCATCG 125924
||||| | ||||||||||| | ||| | || ||||| | ||||| || || |||
Sbjct 142240 GCTTCCAGCGCAATACGCGGCAGATTCAGGCTGATCACGCCGATATTATTGCGGCCCTCG 142299
Query 125925 AATACCGTTTCACCATCTTCGTTCTTCCAGTCACCCAAGAATGAGCGACAGCCCATTGGA 125984
| | | || |||| ||| ||| | || | |||| ||| ||| |||||||| ||
Sbjct 142300 TGGATCATCTCGCCATTTTC-TTCATACA--CGCCCAGGAAACTGCGGCAGCCCATCGGC 142356
Query 125985 GACTTAAACCCACCAGTCGTTTCAACTAGTTTGTCATAGTTCAAAATGTCTGGGTACATA 126044
| || ||| ||| || || || | | ||||| || | ||||| |||||||||
Sbjct 142357 GTTTTGAACGAACCTGTGACTTTCACCACCTGATCATAATTGAGGATGTCCGGGTACATA 142416
Query 126045 CGCTTACTTGCACATTCAAGAGCTAACTTTTTGATGCCGTAGCACGGGTCGCCTTCTTTC 126104
||||| || || ||||| || || | | |||||| ||||| | ||| || ||||
Sbjct 142417 CGCTTGCTGGCGCATTCCAGTGCCAGTTGCTTGATGTCGTAGTTGGCGTCACCGGCTTTA 142476
Query 126105 AGATTCACGCCGTCTCTCAATGTGAAAACAAGCTTAGGGAAAATAGCAGTTTTCTTAGTC 126164
|||||| |||||| | | | || || || || ||||| | ||| ||||| | |
Sbjct 142477 TGATTCAGGCCGTCACGGATGGCAAACACCAGTTTTGGGAATACAGCGGTTTTGCGATTT 142536
Query 126165 TTACCTAGACCTGCAATACGATTCTGAAGAATACTTTTTTGAATAAGTTTTTCTTCCCAC 126224
|| || || || ||||| || || | ||||| || || || || ||||||
Sbjct 142537 TTGCCCAGTCCGGCAATGCGGTTACGCAGAATTGATTGCTGGATCAGGCGCGATTCCCAG 142596
Query 126225 GACGTACCTAACCCGAAGTTGATTGTCGTGAATGGTGTCTGACCGTTTGAAGTCTGCATC 126284
|| || || | || || || || || || ||||| ||||| | || |||| |
Sbjct 142597 GATGTGCCGAGGCCAAAACCGAAGGTGACAAACGGCGTCTGGCCGTTGGCGGTGTGCAGC 142656
Query 126285 GTATTGACTTGATATTCAAACGTCTGGAATGCATCGAACGTTTCCTTTTCAACACGCTTT 126344
||||| || | |||||| | || |||||| || || | || ||||| ||| |
Sbjct 142657 GTATTAACCTCATATTCCAGCGACTGGAAGGCGTCATAACACTCTTTTTCGGTACGGCTG 142716
Query 126345 CGTGCAAAGATAGCAGC-TTTAGAATCAGAGTCGGGATGTTCTTCTCGACCTACTTCGA- 126402
| |||||| | | || | | |||| | | ||| ||| | | | ||
Sbjct 142717 TGAGCAAAGCCATCCGCATCTGCAATCTGCCAC-------TCT--TCGGC--AGTCTGAC 142765
Query 126403 GCCATTTAT--AATATGAC--TTACGAACATAAGGTGCTAGGACTTCGTCGATTCTATTG 126458
| ||||| || || | | |||||| || || || ||||||||||| | ||
Sbjct 142766 GATGTTTATTGAAGCTGGCGGTGACGAAC----GGCGCCAGTACTTCGTCGATGCGGTTA 142821
Query 126459 ATCGTGTTACCGCCGTAGATATGGCTACTTACTTGCTGAATAATCTGAGTTACAACAGTG 126518
|| || | |||||||| |||||||| || ||| |||||||| | || |
Sbjct 142822 ATGGTCGTGCCGCCGTAAATATGGCTGGCGACCTGCGCGATAATCTGCGCGGTGACGGCC 142881
Query 126519 GCAGCAGTGCTAATACTGTTTGGTTCTTCGATTTCAGCATTACCCATTTTGAAGCCGCCT 126578
| || ||| |||| ||||| || ||||| ||||||||||||||||| |||
Sbjct 142882 GTTGCGGTGGAAATAGACTTTGGCGTGTCAATTTCCGCATTACCCATTTTGAAACCGTGA 142941
Query 126579 TCAAACATGCCTTTGATATCAATAAGCATACAGTTGAATTGCGGGAATAATGGACTGTAG 126638
| ||||||||||| | || || ||||| ||||| || |||||| || || ||
Sbjct 142942 TTCAACATGCCTTTAAGGTCGATCAGCATGCAGTTAAACATCGGGAAGAACGGGGAATAA 143001
Query 126639 TCAAGGTCATGAAAATGAATATCGCC 126664
|| ||||||||| |||| || |||||
Sbjct 143002 TCGAGGTCATGATAATGGATTTCGCC 143027
Score = 109 bits (120), Expect = 9e-19
Identities = 222/326 (68%), Gaps = 4/326 (1%)
Strand=Plus/Plus
Query 125238 TAATCCCATACGCGCTCTAGACCTTTGATGTTGTCTCGCATATTCGGGAACTCAGCATAA 125297
|||||||| ||| || || |||| | |||| | ||| || ||| | || ||||
Sbjct 141616 TAATCCCACACGTCTTCCAGCGCTTTCAGATTGTGTTGCAGGTTAGGGTATTCGCCATAG 141675
Query 125298 CAGATGAAACCACCGTTTGCATGAATTGGGTATGCAGC--TTCAAAATCAATTTTCTCAA 125355
||||||||||| ||||| || ||| | | | || | || ||| || || | ||| ||
Sbjct 141676 CAGATGAAACCGCCGTT-GC-TGAGTGGCGGATACGGCGCTTCGAAGTCGAGTTTTTCGT 141733
Query 125356 ATGGGTTCACTTTCTTGAACACGTCTAAGTGAAACGAGTTTGTGTAATAGTCTTTGTCAT 125415
| || || || ||||| ||||| | || || ||| ||||| || |||| |||
Sbjct 141734 ACGGATTTACCTTCTTCTCGACGTCCAGATGGAAGCTGTTGGTGTAGTAACCTTTATCAG 141793
Query 125416 TGATACCTGTAATAACACCGTATTTCTCTTGGTCGAGACGACAGAAACGATCACATAGCG 125475
| | ||| | | | ||| ||| ||| || ||||||||||| || || || ||
Sbjct 141794 TCACACCGGCCACCAGCCCGAATTCGGCTTTATCCAGACGACAGAAGCGGTCGCACAGGT 141853
Query 125476 ATTCACTTGGTGTACTGTACAGACTGAAACCGTAGCCCGTCAGTTCTTTCCATGCATCGG 125535
||| || || || |||||||| ||||||||||||||||| |||||||| ||||
Sbjct 141854 TTTCGCTCGGCGTGCTGTACAGGCTGAAACCGTAGCCCGTTTCGTCTTTCCAGCTTTCGG 141913
Query 125536 TGTACGCTCTAAGAGTTTCCACAATC 125561
| |||| | ||| ||||||||
Sbjct 141914 TTGCCGCTTTCAGACGAGCCACAATC 141939
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 793070634558720
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