Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_028840.1 Length=111751 Score E Sequences producing significant alignments: (Bits) Value seq828 96.9 2e-15 >seq828 Length=218660 Score = 96.9 bits (106), Expect = 2e-15 Identities = 124/171 (73%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 106575 GAAGGTGGTCAACACCTAAATGTCAATGTGTTAAGTCGTGATCAGCTTTTGGATGCACAG 106634 ||||||||||| ||||| || || || || | ||||||| || ||||| Sbjct 42313 GAAGGTGGTCAGCACCTGAACGTTAACGTACTGCGTCGTGAAACACTGGAAGATGCGGTT 42254 Query 106635 AAACATCCTGAAAAATACCCTCAATTAACTATCCGTGTTTCAGGATACGCTGTACGTTTT 106694 ||||||||||| |||||||| || | ||||| ||||| || || || || |||||||| Sbjct 42253 AAACATCCTGAGAAATACCCACAGCTGACTATTCGTGTGTCTGGCTATGCGGTACGTTTC 42194 Query 106695 AATGCACTGACGCGTGAACAACAGAACGACGTTATTAGTCGTACATTTACT 106745 || ||||||| |||||| ||| ||||| |||| ||||| || ||| Sbjct 42193 AACTCACTGACTGCTGAACAGCAGCGTGACGTGATTACCCGTACTTTCACT 42143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357178506231488