Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_028892.1 Length=49949 Score E Sequences producing significant alignments: (Bits) Value seq35 127 7e-25 >seq35 Length=455554 Score = 127 bits (140), Expect = 7e-25 Identities = 163/225 (72%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 39081 GAAGTCGATGTCCACGTCGGGCATGGAGACACGCTCAGGGTTCAGGAACCGCTCGAAGAT 39140 ||| |||| ||| | |||||||||||| ||||| |||||||| ||||| || ||||| | Sbjct 158575 GAAATCGACGTCGAAGTCGGGCATGGAAACACGTTCAGGGTTGAGGAAACGTTCGAACAG 158516 Query 39141 GAGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCCCGAGGGCGTACGCGGCCAGCGAGCC 39200 ||| | || || ||||| ||||| || || || || || ||||||| || Sbjct 158515 GAGGTCAAACTCGAGCGGATCCAGATCGGTAATTTTCAGCGCATATGCAACCAGCGAACC 158456 Query 39201 AGCCGCAGAGCCGCGCCCAGGGCCGACCCACACGCCGTTCTCCTTCGCCCAGCCGATGAA 39260 || | || || ||||| || || ||| ||||| ||| ||||||| ||| |||||| Sbjct 158455 GGCACCGGAACCACGCCCGGGACCTACCGGCACGCTGTTATCCTTCGACCACTGGATGAA 158396 Query 39261 GTCGGCGACGACGAGGAAGTACGACGGGAACCCCATCTGGTTGAT 39305 || |||| |||||||| |||||| |||||||||||||| Sbjct 158395 TTCCATTACGATCAGGAAGTATCCCGGGAATCCCATCTGGTTGAT 158351 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159584648196588