Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_028898.1 Length=35764 Score E Sequences producing significant alignments: (Bits) Value seq14927 118 2e-22 >seq14927 Length=58641 Score = 118 bits (130), Expect = 2e-22 Identities = 260/387 (67%), Gaps = 12/387 (3%) Strand=Plus/Minus Query 4873 GAGTATGCCAATCTTGACGCACTCGTAATGGACGCCACCGAAGAACTTATTGA--TGAAT 4930 || |||| ||||| ||||| || ||||||||||||||| | || | ||||| || | Sbjct 40810 GACTATGAAAATCTGGACGCGCTGGTAATGGACGCCACCAACGACATGATTGACCCGATT 40751 Query 4931 GGCATCGTGATGACACCGATTTAGTGGTGATTACCGGTCGCAAGTTGCTTGCGGATAAAT 4990 ||| || ||||||| | ||||| || ||| || || |||| ||||| |||| Sbjct 40750 --TATCAGGACGACACCGGCCTGGTGGTTATCTGCGGGCGTCAGCTGCTGGCGGACAAAT 40693 Query 4991 ATTTCCCGATTGTGAATCAGCAAAACGCACCA----ACCGAACAACTTGCCGCTGATATT 5046 | |||||| | ||||| ||| |||| | | ||| ||||| || ||||| Sbjct 40692 ACTTCCCGCTGGTGAA----CAAGGCGCAGGAGAACTCTGAAAGTCTTGCGGCGGATATG 40637 Query 5047 GTGATCTCACAAAAACGCATTGGGGGCTTAAAAGCGGTGCGTGTGCCGTTCTTCCCGGCG 5106 | ||| || || ||||| || |||| |||||||| || || |||||| || Sbjct 40636 ATTATCAGCCAGAAGCGCATCGGTAACTTACCGGCGGTGCGCGTACCTGCCTTCCCAGCC 40577 Query 5107 AATGCGATTTTAATCACTAAGCTGGAAAATTTAGCCATCTATGTGCAAGAGGGGACAACC 5166 |||||| | | |||||| ||||| ||| | |||| || ||| || || || | Sbjct 40576 AATGCGCTCATGATCACTCGTCTGGATAATCTGTCCATTTACTGGCAGGACGGCACTCAC 40517 Query 5167 CGCAAGCATATTGAGAACGTGCCGAAAAAAGACCGTATTGAAACCTACGAATCAGAAAAT 5226 ||| ||||| || | ||||| || |||||||| |||| ||||||||| ||| Sbjct 40516 CGCCGTCATATCGAAGAGGTGCCAAAGCGTGACCGTATCGAAAACTACGAATCCATCAAT 40457 Query 5227 ATCGACTACGTTGTCGAAGATTATGGC 5253 || | || || ||||||||| || Sbjct 40456 GAAGATTTTGTGGTGGAAGATTATCGC 40430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 114229751787608