Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_029091.1 Length=168771 Score E Sequences producing significant alignments: (Bits) Value seq828 172 6e-38 >seq828 Length=218660 Score = 172 bits (190), Expect = 6e-38 Identities = 146/180 (81%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 123121 GTCAACATCTGAACGTTAACGTTCTGCGTCGTGAAACTCTAGAAGATGCAGTTAAGCATC 123180 |||| || |||||||||||||| |||||||||||||| || |||||||| ||||| |||| Sbjct 42306 GTCAGCACCTGAACGTTAACGTACTGCGTCGTGAAACACTGGAAGATGCGGTTAAACATC 42247 Query 123181 CAGAAAAATATCCGCAGCTGACCATCCGTGTATCTGGTTATGCAGTTCGCTTTAACTCTC 123240 | || ||||| || |||||||| || ||||| ||||| ||||| || || || ||||| | Sbjct 42246 CTGAGAAATACCCACAGCTGACTATTCGTGTGTCTGGCTATGCGGTACGTTTCAACTCAC 42187 Query 123241 TGACTCCGGAACAGCAGCGCGACGTTATCGCTCGCACCTTTACTGAGAGTCTATAATGGC 123300 ||||| | ||||||||||| ||||| || | || || || ||||| || || |||| || Sbjct 42186 TGACTGCTGAACAGCAGCGTGACGTGATTACCCGTACTTTCACTGAAAGCCTGTAATCGC 42127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 539474622813840