Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_029099.1 Length=49797 Score E Sequences producing significant alignments: (Bits) Value seq725 87.8 6e-13 >seq725 Length=236385 Score = 87.8 bits (96), Expect = 6e-13 Identities = 167/239 (70%), Gaps = 9/239 (4%) Strand=Plus/Plus Query 26288 GTTCCGAGCAACT-ACGATCCGATTAATCGCACATACTCCGGGACGTGGGACGGTGTTTT 26346 ||||||| ||||| |||| || | | || | || ||||| || ||||| || || Sbjct 215407 GTTCCGA-CAACTTACGACCCTGTCACCCGGTCTTATTCCGGCACTTGGGATGGAACGTT 215465 Query 26347 TAAGTGGGCGTGGAGCAATAACCCGGCATGGGTGCTTTATGACCTGATCATGAATCAGCG 26406 ||| |||||||||| | |||||||| | ||| | | |||||| | || ||||| | || Sbjct 215466 TAAATGGGCGTGGACCGATAACCCGTCGTGGATTTTCTATGACATCGTCGTGAATAACCG 215525 Query 26407 CTATGGTTTAGACCAGCG-CGAACT--TGGCATCCCGGTTGACAAGTGGTCGCTGTACGA 26463 || |||| | | |||||| | ||| || || | || |||||| ||| ||| Sbjct 215526 CTTTGGTCTCGGCCAGCGGCTCACTGCTGACAATA---TCGATAAGTGGGAGCTTTACCG 215582 Query 26464 GGTGGCGCAATACTGTGATGAGCTTGTGCCGGACAATCGCGGCGGGA-TGGAACCGCGC 26521 || ||||||||||||| | | ||||||||| ||||| || | |||||||| || Sbjct 215583 CGTCTCGCAATACTGTGACCAAATGGTGCCGGACGGCCGCGGGGGAAGTGGAACCGAGC 215641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159098645781772