Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq15718 105 6e-18 >seq15718 Length=23337 Score = 105 bits (116), Expect = 6e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 6623 GCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCCATG 6682 |||||||| | || ||||| | || || |||||||| || || || | |||||| Sbjct 3075 GCGATCATATGAGTCAGCAGGGAATAGGAGGCGATGTTGAAAGGGACTCCCAGGCCCATG 3134 Query 6683 TCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGGCAG 6742 || | || || |||||||| |||||||| ||| | ||| |||||||| || Sbjct 3135 TCGGCGCTGCGCTGGTAGAGCTGACAGGACAGGCGCCCCTCCGCCACGTAGAACTGCACC 3194 Query 6743 AGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCGCACATC 6802 ||| |||||||||||| || |||||||| || | ||| || || ||||| ||||| | Sbjct 3195 AGGCAGTGGCACGGGGGCAGGGCCATCAGGGGCAAGGCCTGCGCGTCCCACGAGCACAGC 3254 Query 6803 ACGATCCTTCTGTCATCAGGGTT 6825 || || | | ||||||||| || Sbjct 3255 ACCATGCGCCGGTCATCAGGATT 3277 Score = 105 bits (116), Expect = 6e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 34520 AACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGATG 34579 || ||||||||| | | || ||| ||||| ||||| || || ||| | || |||||| Sbjct 3277 AATCCTGATGACCGGCGCATGGTGCTGTGCTCGTGGGACGCGCAGGCCTTGCCCCTGATG 3218 Query 34580 GCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTCCTGC 34639 || || |||||||||||| ||| || |||||||| ||| | ||| |||||||| Sbjct 3217 GCCCTGCCCCCGTGCCACTGCCTGGTGCAGTTCTACGTGGCGGAGGGGCGCCTGTCCTGT 3158 Query 34640 CAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTAC 34699 |||||||| || || | |||||||| | || || || |||||||| || || Sbjct 3157 CAGCTCTACCAGCGCAGCGCCGACATGGGCCTGGGAGTCCCTTTCAACATCGCCTCCTAT 3098 Query 34700 GCTCTGCTCACGTACATGATCGC 34722 | ||||| || | |||||||| Sbjct 3097 TCCCTGCTGACTCATATGATCGC 3075 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447876703824480