Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq15718 105 6e-18
>seq15718
Length=23337
Score = 105 bits (116), Expect = 6e-18
Identities = 145/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 6623 GCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCCATG 6682
|||||||| | || ||||| | || || |||||||| || || || | ||||||
Sbjct 3075 GCGATCATATGAGTCAGCAGGGAATAGGAGGCGATGTTGAAAGGGACTCCCAGGCCCATG 3134
Query 6683 TCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGGCAG 6742
|| | || || |||||||| |||||||| ||| | ||| |||||||| ||
Sbjct 3135 TCGGCGCTGCGCTGGTAGAGCTGACAGGACAGGCGCCCCTCCGCCACGTAGAACTGCACC 3194
Query 6743 AGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCGCACATC 6802
||| |||||||||||| || |||||||| || | ||| || || ||||| ||||| |
Sbjct 3195 AGGCAGTGGCACGGGGGCAGGGCCATCAGGGGCAAGGCCTGCGCGTCCCACGAGCACAGC 3254
Query 6803 ACGATCCTTCTGTCATCAGGGTT 6825
|| || | | ||||||||| ||
Sbjct 3255 ACCATGCGCCGGTCATCAGGATT 3277
Score = 105 bits (116), Expect = 6e-18
Identities = 145/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 34520 AACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGATG 34579
|| ||||||||| | | || ||| ||||| ||||| || || ||| | || ||||||
Sbjct 3277 AATCCTGATGACCGGCGCATGGTGCTGTGCTCGTGGGACGCGCAGGCCTTGCCCCTGATG 3218
Query 34580 GCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTCCTGC 34639
|| || |||||||||||| ||| || |||||||| ||| | ||| ||||||||
Sbjct 3217 GCCCTGCCCCCGTGCCACTGCCTGGTGCAGTTCTACGTGGCGGAGGGGCGCCTGTCCTGT 3158
Query 34640 CAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTAC 34699
|||||||| || || | |||||||| | || || || |||||||| || ||
Sbjct 3157 CAGCTCTACCAGCGCAGCGCCGACATGGGCCTGGGAGTCCCTTTCAACATCGCCTCCTAT 3098
Query 34700 GCTCTGCTCACGTACATGATCGC 34722
| ||||| || | ||||||||
Sbjct 3097 TCCCTGCTGACTCATATGATCGC 3075
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 447876703824480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |