Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq15718 93.3 3e-14 >seq15718 Length=23337 Score = 93.3 bits (102), Expect = 3e-14 Identities = 160/224 (71%), Gaps = 9/224 (4%) Strand=Plus/Plus Query 29717 CCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACC 29776 || ||||| | || ||||| | || || || || ||| ||||||||| || || || Sbjct 3063 CCTGTGACCCGTGCGATCATATGAGTCAGCAGGGAATAGGAGGCGATGTTGAAAGGGACT 3122 Query 29777 CCGAGCCCCATGTC--CCCTGACCTCTGGTAGAGCTGGCACGAGA-GCTCTCCGTCGCTC 29833 || || |||||||| | ||| | |||||||||||| || || | || | || ||| | Sbjct 3123 CCCAGGCCCATGTCGGCGCTG--CGCTGGTAGAGCTGACAGGACAGGCGCCCCTCCGC-C 3179 Query 29834 ACGTAAAACTGACACATGGCA-TGGCACGGAGGAAGGGCCATGAGACCCAAGTCTTTGGG 29892 ||||| ||||| ||| |||| |||||||| || |||||||| || |||| | | | Sbjct 3180 ACGTAGAACTG-CACCAGGCAGTGGCACGGGGGCAGGGCCATCAGGGGCAAGGCCTGCGC 3238 Query 29893 GTTCCAGGCACACACGATGATGCGCCTGTCTTCTGG-GTTGTTC 29935 || ||| | |||| | ||||||| ||| || || |||||| Sbjct 3239 GTCCCACGAGCACAGCACCATGCGCCGGTCATCAGGATTTGTTC 3282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405822463852924