Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq15718 89.7 4e-13 >seq15718 Length=23337 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/222 (71%), Gaps = 5/222 (2%) Strand=Plus/Plus Query 27211 CCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACC 27270 || ||||| | || ||||| | || || || || ||| ||||||||| || || || Sbjct 3063 CCTGTGACCCGTGCGATCATATGAGTCAGCAGGGAATAGGAGGCGATGTTGAAAGGGACT 3122 Query 27271 CCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGA-GCTCTCCATCGCTTAC 27329 || || |||||||| | | ||||||||||||||| || | || | || ||| || Sbjct 3123 CCCAGGCCCATGTCGGCGCTGCGCTGGTAGAGCTGACAGGACAGGCGCCCCTCCGC-CAC 3181 Query 27330 GTAAAACTGACATATGGC-GTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGT 27388 ||| ||||| || ||| ||||||||| || || ||||| ||| |||| | | | || Sbjct 3182 GTAGAACTG-CACCAGGCAGTGGCACGGGGGCAGGGCCATCAGGGGCAAGGCCTGCGCGT 3240 Query 27389 TCCAGGCGCACACGATGATGCGCCTGTCTTCTGG-GTTGTTC 27429 ||| | ||||| | ||||||| ||| || || |||||| Sbjct 3241 CCCACGAGCACAGCACCATGCGCCGGTCATCAGGATTTGTTC 3282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369197215098254