Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_030917.1
Length=93577
Score E
Sequences producing significant alignments: (Bits) Value
seq35 401 4e-107
>seq35
Length=455554
Score = 401 bits (444), Expect = 4e-107
Identities = 664/958 (69%), Gaps = 18/958 (2%)
Strand=Plus/Minus
Query 78213 TCACCAAGGCCATCAACTGGAACAAGGTCACCGACGAGGTCGACGACACCGTGTGGGATC 78272
||| ||| ||||||||||||||||| || ||||| ||| | |||||| | |
Sbjct 13190 TCAGCAAAGCCATCAACTGGAACAAAATCCAGGACGATAAAGACCTCGAAGTGTGGAACC 13131
Query 78273 GACTCACCGGCAACTTCTGGTTGCCCGAGAAGGTACCGGTGTCCAACGACATCCCATCCT 78332
| || || || |||||| |||| || ||||| ||| |||| ||||| || || || |
Sbjct 13130 GCCTGACGTCGAATTTCTGGCTGCCGGAAAAGGTGCCGTTGTCGAACGATATTCCGTCGT 13071
Query 78333 GGGACACCCTTACGCCGGAAGAGAAGGAACTCACTATGCGTGTGTTCACCGGCCTCACCC 78392
||| || || | || | || || |||| || || || || || |||||||| || |
Sbjct 13070 GGGCGACGCTCAGCGCGCAGGAAAAACAACTGACGATCCGCGTATTTACCGGCCTGACGC 13011
Query 78393 TGCTCGACACCATCCAGGGCACAGTTGGCGCCATCTCGCTCATCGCCGACGCCAACACCC 78452
|||| || ||| | || | || ||||| |||| || || || || |
Sbjct 13010 TGCTGGATACCGTGCAAAACGTGGTCGGCGCACCGACGCTGATGAAAGATGCGGTGACGC 12951
Query 78453 CGCACGAGGAGGCGGTGCTCACCAACATCGCGTTCATGGAGTCGGTACACGCCAAGTCCT 78512
| ||||| || ||||| | | || ||| || ||||| |||| || || || |
Sbjct 12950 CACACGAAGAAGCGGTTTACTCGAATATCTGCTTTATGGAAGCGGTGCATGCGCGTTCTT 12891
Query 78513 ACAGCTCGATCTTCTCAACGCTATGCTCCTCCAAGCAGATTGACGAGGCGTTCCGTTGGT 78572
| || || || ||||| ||||| ||| || || | | | || || || | ||| |||
Sbjct 12890 ATAGTTCAATTTTCTCGACGCTGTGCGCCACCGTGGACGTGGATGAAGCCTACCGCTGGA 12831
Query 78573 CGGAGGAGAACGAGTACCTGCAGCGCAAGGCCCAGATCGTCCTGGACTACTACCGCGGCG 78632
||||| |||| ||||| || || |||| | || || ||| |||||
Sbjct 12830 GCGAGGAAAACGTCGCGCTGCAAAATAAAGCGGCGATCATTTTGTCGTATTACGACGGCG 12771
Query 78633 ACGACCCCTTGAAGCGGAAGGTGGCCAGTACGCTCCTGGAGGGCTTCCTCTTCTACTCGG 78692
| || || ||| | ||| || ||||| | |||| ||| ||||| |||||||| |
Sbjct 12770 AAGATCCGCTGATGAAGAAAGTCGCCAGCGTGTTCCTTGAGTCGTTCCTGTTCTACTCCG 12711
Query 78693 GCTTCTACCTGCCGATGTACTGGTCGAGCCGCGCCAAGCTGACGAACACCGCGGACGTGA 78752
| || || |||||||||||||||||||||||||||||||| || ||||||||||| |||
Sbjct 12710 GTTTTTATCTGCCGATGTACTGGTCGAGCCGCGCCAAGCTCACCAACACCGCGGATCTGA 12651
Query 78753 TCCGGTTGATTATCCGAGACGAAGCAGTTCATGGGTACTACATCGGATACAAGTACCAGC 78812
|||| |||| ||||| |||||||| ||||| || ||||||||||| || || | ||||
Sbjct 12650 TCCGTCTGATCATCCGTGACGAAGCGGTTCACGGTTACTACATCGGCTATAAATTCCAGA 12591
Query 78813 GAGGCCTCGAGACCCAGG---GGCCGGCGCGGCAGGCTGAGCTCAAGGAGTACACGTTCG 78869
|| || | | | || | | ||| ||| | || |||||||| | |||| |
Sbjct 12590 AAGCGCT---GGCACTGGAAAGCGAAGAGCGTCAGCGTCAGATCAAGGAGCAGGCGTTTG 12534
Query 78870 ATCTGCTCTCGGAGCTCTACGACAACGAGTGTGACTACACCGAGCAGCTCTATGACGACG 78929
||||| | ||| | |||||||||||| ||||||||| | || ||||||| |
Sbjct 12533 ATCTGATTCAGGATTTGTACGACAACGAGATCCGCTACACCGAAGAACTGTATGACGGTG 12474
Query 78930 TCGGACTCACCGAGGATGTCAAGAAGTTCCTGCGCTACAACGGCAACAAGGCGCTGATGA 78989
| || | ||| || || ||||| ||||||| ||||||| |||||| ||||||||||
Sbjct 12473 TAGGCTGGAGCGAAGACGTGAAGAAATTCCTGCATTACAACGCCAACAAAGCGCTGATGA 12414
Query 78990 ACCTCGGCTACGAAGCACTGTTCCCCAAGGAAGAGACCATGGCAG------ACCCGGCCA 79043
| |||||||||||||| |||||||| || | |||||| | | ||||| |
Sbjct 12413 ATCTCGGCTACGAAGCCCTGTTCCC------AGCCAGCATGGCGGATGTGAATCCGGCGA 12360
Query 79044 TCATGTCCGCGCTCTCACCAGGCGGCGACGAGAACCACGACTTCTTCTCCGGGTCGGGCT 79103
|| | ||||| | || ||| || |||||| |||||||||||||||||||| || || |
Sbjct 12359 TCCTCTCCGCATTATCGCCAAACGCCGACGAAAACCACGACTTCTTCTCCGGATCCGGAT 12300
Query 79104 CGAGCTACGTCATCGGCAAAGCTGAAGCCACGGCAGATGAGGACTGGGACTTCTGATG 79161
| || || ||||||||||| | || | ||| ||||||||||| ||||||||
Sbjct 12299 CCTCGTATGTGATCGGCAAAGCCGTCAATACCGAAGACGAGGACTGGGATTTCTGATG 12242
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 299070494807012
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |