Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_030919.1
Length=42418
Score E
Sequences producing significant alignments: (Bits) Value
seq6760 279 1e-70
seq725 259 1e-64
>seq6760
Length=71796
Score = 279 bits (308), Expect = 1e-70
Identities = 360/497 (72%), Gaps = 0/497 (0%)
Strand=Plus/Plus
Query 1786 TGTTTGGTTTCTATGTAAATTCTACCAATATATTCTCCAAGAATACCTATTCCTATCAAT 1845
|||||||| || || ||||| || || || || || || || | || || ||||| |
Sbjct 16337 TGTTTGGTCTCGATATAAATCCTTCCGATGTACTCACCTAGCACGCCAATACCTATTAGC 16396
Query 1846 TGAACGCCACCCAGGAAAAGAACAGAAACAAGAAGAGACGGGTAGCCAGGAACATTATTT 1905
|| | ||||| |||||||||| |||||| | | |||||| || ||| |||| ||
Sbjct 16397 TGGATTCCACCGAGGAAAAGAATAGAAACCAAGATAGACGGATAACCATGAACGGGGTTG 16456
Query 1906 CCAAATATTAATTTATCAATAATCATCCATGCACCGTAAAGGAATGACATACCTGCAATA 1965
||||| || | | ||||||||||| || ||||||| ||| |||| ||| || | |
Sbjct 16457 CCAAAAATGAGGGTGTCAATAATCATATATACACCGTAGGCGAAAGACAGACCGGCCACA 16516
Query 1966 AACAATCCAATGTAAGTCCATATGCGGAGCGGAAATGTTGAGAAAGAAGTTATTCCCTCC 2025
|| | || || || ||||| || || || ||||| |||||||| || ||||| || ||
Sbjct 16517 AAAAGACCTATATACGTCCACATTCGCAGTGGAAAAGTTGAGAACGATGTTATGCCTTCG 16576
Query 2026 AGCGCCAGGTTCCATAATTTCCAGCCGTTGAATTTCGAATCACCGGCCACGCGTTCGGCA 2085
|| || |||||||| | |||||| || || ||||| | |||||| |||||||| |
Sbjct 16577 AGAGCAAGGTTCCACAGTTTCCAACCATTAAATTTTGTCGAACCGGCAACGCGTTCATCT 16636
Query 2086 CGGGCATATTTAACAACATCCGTTTTTCCGCCAACCCAACTGAGCACACCCTTCATAAAC 2145
|||| ||||| ||||| || || || || |||||| || || || ||||| ||
Sbjct 16637 CGGGTATATTCGACAACTTCAGTGCGACCACCGACCCAAGACAGAACCCCTTTCATGAAT 16696
Query 2146 AAGTTGCGTTCTGGCATTTGTTTGATGTTCTCGACAACCGCACGGCTCATTAACCGAAAG 2205
||||| ||||| || | || ||||| || || || || || |||||||| ||
Sbjct 16697 AAGTTTCGTTCAGGGAGCAACTTAATGTTTTCTACGACAGCGCGAGACATTAACCTGAAA 16756
Query 2206 TCGCCAACATTTTCTTCGATTTTTGGATTGCTGATTTTATTGTGCAGCTTATAAAACCAC 2265
|||||||| ||||| || || || || |||||||| | || || |||||||||||||||
Sbjct 16757 TCGCCAACGTTTTCCTCAATCTTAGGCTTGCTGATCATGTTATGGAGCTTATAAAACCAC 16816
Query 2266 TCAGCTGTCTTACGCTT 2282
||||| | ||||||||
Sbjct 16817 TCAGCGCTTTTACGCTT 16833
>seq725
Length=236385
Score = 259 bits (286), Expect = 1e-64
Identities = 553/821 (67%), Gaps = 29/821 (4%)
Strand=Plus/Plus
Query 14638 CGTCTGAGGAACGGAGAAGAGTCCGATACCCTGAAGACCGGAATCGAAGAGCTTGACGCT 14697
||||| | ||||| || ||||| || || || || ||||| || ||||| ||||
Sbjct 188784 CGTCTTAAAAACGGTGAGGAGTCGGACACGCTTAAAACCGGCATACCTGAGCTGGACGAA 188843
Query 14698 ATCACCGGAGGGATGAACGCAGAAGACCTTGTGATTATTGCTGCTCGTCCAGGTATGGGT 14757
|| || || || ||||| || || || | || | |||||||| || ||||||||
Sbjct 188844 ATTACAGGCGGACTGAACAACGAGGATCTGATCATCGTAGCTGCTCGCCCTGGTATGGGG 188903
Query 14758 AAAACCGAACTGGCGCTGAAGATAGCCGAAGGCGTGGCAAGTCGTGTTATTCCTGGTTCT 14817
|||||||| | || |||| | || ||||| || || || ||||| || ||
Sbjct 188904 AAAACCGAGTTTGCTCTGACCGTGGCTGAAGGTGTTGCGGAAAGTACTATTC--GGATC- 188960
Query 14818 GGCG---------TCCGGCGCGGTGTGTTGATTTTCTCGATGGAAATGAGCGCCATTCAG 14868
|||| | | |||||| ||| |||||||| |||||||||||||| |||
Sbjct 188961 GGCGATGAGGTGTTGCCGCGCGGCGTGCTGATTTTCAGCATGGAAATGAGCGCTCAGCAG 189020
Query 14869 GTTGTTGAGAGAGGGATTGCCGGCGCAGGAATGATGTCGGTCAGTGTGCTGCGTAACCCG 14928
|| | || | | | || ||||| || ||| |||| || ||||| || ||
Sbjct 189021 GTCATAGAACGCCAGTTGGCTGGCGCCTCAAACATGCCGGTGTCTGCCCTGCGCAAACCT 189080
Query 14929 TCACGTATGGACGATGAAGGATGGGGCGAGAGTTGCAAGCGGGATGAAG----TTGCTGG 14984
||||||||| ||||||||| |||| | | | | | || || ||| | ||||
Sbjct 189081 TCACGTATGAACGATGAAGACTGGG-CACGCATATCGATGGGCATTAAGCGTTTATCTGG 189139
Query 14985 CAGATCTGGATGTGTGGGTAGTTGACGCATCGCGTTTATCTGTCGAAGAAATCAGGTCCA 15044
| ||| | |||||||| || || || ||| | | | || | ||| | | |
Sbjct 189140 C----CTGCAGGTGTGGGTTGTCGATGCGTCGAAACTGACCATTGAGCAGATCCGCGCGA 189195
Query 15045 TTTCCGAACGCCACAAGCAGGAGCATCCTAATCTGTCACTGATTATGGCTGACTATCTCG 15104
|| | ||| | ||||| | | | | || ||||| || || || || || || || |
Sbjct 189196 TTGCGGAAAGGCACAAACGGAAATACCCAAATCTATCTCTCATCCTGTGCGATTACCTTG 189255
Query 15105 GGCTAATTGAGAAACCAAAAGCGGAACGTAATGACCTCGCCATAGCACATATCTCCGGTA 15164
| || || || || || || ||||| || ||||| || || || || ||||||||
Sbjct 189256 GCCTGATCGAAAAGCCGCGTGCTGAACGAAACGACCTGGCGATCGCCCACATCTCCGGCG 189315
Query 15165 GCCTGAAAGCGATGGCGAAAGACCTGAAAACTCCAGTTATCTCATTAAGCCAGCTCTCCC 15224
|| ||||| |||||||| |||||||| || ||||| || ||| | || ||||| ||||
Sbjct 189316 GCATGAAACGCATGGCGAAGGACCTGAAGACGCCAGTGATGTCACTTAGTCAGCTGTCCC 189375
Query 15225 GCGATGTTGAGAAGCGGCCAAAC------AAGCGCCCGACAAACGCAGATTTGCGTGATT 15278
|||| || |||||||| ||||| || || ||| ||| | || |||| ||
Sbjct 189376 GCGACGTGGAGAAGCGACCAAAGGGCCAGAAACGGCCGGTTAACTCTGACCTGCGCGACG 189435
Query 15279 CAGGAAGCATTGAACAGGACGCAGACTCAATCATCATGCTCTATCGGGAAGCGGTATATG 15338
|| ||||| || |||||||| ||| || ||||| || || |||| ||| ||||
Sbjct 189436 GGGGGAGCATCGAGCAGGACGCCGACGGGATTTATATGCTGTACCGCGAAGGGGTGTATG 189495
Query 15339 A-CGAGAACAGTAGCGCCGCGCCATTTGCTGAAATCATCGTGACGAAAAACCGTTTTGGC 15397
| | ||| || |||||||| || ||||||||||||||||| || ||||| |||||
Sbjct 189496 AACCCGAA-AGCCCTGCCGCGCCGTTCGCTGAAATCATCGTGACCAAGAACCGATTTGGT 189554
Query 15398 TCGCTTGGTACGGTTTACCAGCGGTTCTGCAACGGACACTT 15438
||| ||||| |||||||||| |||| ||||| |||||
Sbjct 189555 GAGCTCGGTACCGTTTACCAGCAGTTCAAAAACGGGCACTT 189595
Score = 239 bits (264), Expect = 1e-58
Identities = 485/708 (69%), Gaps = 13/708 (2%)
Strand=Plus/Plus
Query 3948 CATTCATCAATCAACCTTTTTGCCTCGTGAGGCTCAAGCCAGCGGATACGCTTATTTTTC 4007
|||||||||| || | || || || | || || ||||| | || |||||||||||
Sbjct 173927 CATTCATCAACCAGGCGTTGCGCTTCATTTGGTTCGAGCCATCTGACGCGCTTATTTTTT 173986
Query 4008 GGCTGAGGAACTTTGATGATCGGAGCCTTATCCAGCATCTTCCATTCGCGTTCAGCAGCC 4067
| ||| || ||||| || | || || || |||||| ||||| || ||||| || ||
Sbjct 173987 GCCTGTGGGACTTTTATCACTGGCGCTTTCTCCAGCCATTTCCAATCTCGTTCTGCGGCG 174046
Query 4068 CGGAGGAGTGCCTTAATGAATGAAAGGTGAGTTGCTTTTGTGGCTACTGCTGCCGGCTTA 4127
|| || || | ||| || | | ||||| |||| || |||||| ||||| | |||
Sbjct 174047 CGCAGCAGCGACTTCATCAGGGCGAGGTGTTTTGCCTTGGTGGCTG-TGCTGAC--CTTC 174103
Query 4128 -GGCTTGAATACTGGAG-GCTGCT-TCCCATTCTTCCTGCAAGCTTCATCCATT-AACTT 4183
||| ||||| | ||| | |||| ||||| |||| | || |||
Sbjct 174104 TGGCGCTCATACTTTGGCGCTTCGATCCCTCTCTTCGC-CAAGGACTGTGAATGCAACCG 174162
Query 4184 CCAGTTTTCCTCATGCCGCCGATTAGTCATCTTCTGGATGGCGGAGTAAATCTTCGTCTC 4243
||||||| | ||| || ||| ||| || ||| || | ||| || || | ||
Sbjct 174163 ATGGTTTTCCGCTGCCCGGCGGTTAACCATTTTGCTGATCGCCGTGTAGATTTTGGCTTC 174222
Query 4244 GGTAATATCCTTCAACTGCATCCCTGCAAAATGCTGGAGCCAGAATCCTATCCGACTCTT 4303
||||||||||||||||| || |||| |||||||| ||||||||||| ||||| || ||
Sbjct 174223 GGTAATATCCTTCAACTTCACCCCTTCAAAATGCATCAGCCAGAATCCCATCCGGCTTTT 174282
Query 4304 GTCATCATCCAGCGACTTCTTATGCGCCTTCTCCTCTAACCACCTGACACAGGCCTCCTC 4363
|||||||||||| || ||||| | ||| || || |||||||| | ||||||||| ||
Sbjct 174283 GTCATCATCCAGAGATTTCTTCTCAGCCCGTTCTTCCAACCACCTTAAACAGGCCTCTTC 174342
Query 4364 AAAAGTCATGCCAGGCGTCTCTCCTAATTTATTTACCCTCCATGCTTCGGCCTTCAGCTT 4423
|||||| | | |||| || || | | || | ||| || | || ||
Sbjct 174343 AAAAGTGACGTCAGGAAAATCGCCCAGCCGGTCTATTCGCCAGAGCTCTGATTTTCTTTT 174402
Query 4424 GTCATGAAGCT-CTGTGGCCTGCCTTTTGTCCTTTGTCCCAAGAGACTGCTTAAATCTTT 4482
||| || |||| |||| |||| ||| |||| | |||||||||||| | |||| |||||
Sbjct 174403 GTCGTGCAGCTCCTGT-GCCTCCCTCTTGTTCGCTGTCCCAAGAGATTCTTTAAGTCTTT 174461
Query 4483 TGCCGTTCGGCAATGTGAAACTGGCGTACCAGGTTTCACCTCTGCGGAATAGTGACATTT 4542
||| ||||| | ||| || ||||||||| | | |||||| ||||| | ||||| |
Sbjct 174462 GCCCGCCCGGCAGCGAGAAGCTCGCGTACCAGATGTTACCTCTACGGAAGATAGACATGT 174521
Query 4543 CAGTTCCTCTGTTATGTCATCACCCGCGCTCACTTGGACAGTATGCAGCGGAGATTGAAG 4602
|||||| ||| |||||| | ||||| |||||| | | ||| | ||
Sbjct 174522 TTTTTCCTCGAGCATG---TCACCCTCACTCACGGCGACAGTGTTGATCGGTTTATTCAG 174578
Query 4603 TGCCGCAACGCAGGCTTGTCGTGTGGTGAGGTAAGGGGATTTAGGTTT 4650
||| |||| || ||||| || ||| || ||||||||| || |||||
Sbjct 174579 TGCGGCAATACATGCTTGCCGGGTGAAGATGTAAGGGGACTTTGGTTT 174626
Score = 158 bits (174), Expect = 3e-34
Identities = 152/195 (78%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 3410 GTGGGACATATTTGGGACAGAAGTACCAAAAATCGAGTCAATTTGTCGAGCATGTTCAGT 3469
|||||||| ||||||||||||| |||||||| | ||| || || || || || ||
Sbjct 175480 GTGGGACAGATTTGGGACAGAAACCCCAAAAATAGCGTCTATCTGCTTCGCGTGCTCCGT 175539
Query 3470 CAGGTGATTTGGTGCCAGATGAGCATATCGGCGAACCATTTCGATAGACTCCCAGCCACC 3529
| ||||| || |||||||| || ||||| || ||||| ||||| ||||||||||| ||
Sbjct 175540 TAAATGATTCGGCGCCAGATGCGCGTATCGCCGTACCATCTCGATCGACTCCCAGCCGCC 175599
Query 3530 CATTTCCTGCAATACCGAAATCGGAACGCCAGCCTGAACTAACCAACTTGCCCACGTGTG 3589
||||||||| | || || | ||| || || ||||||| | ||| |||||||| |||||
Sbjct 175600 CATTTCCTGAAGAACTGACAACGGGACACCGGCCTGAATCAGCCAGCTTGCCCATGTGTG 175659
Query 3590 CCTCAGGTCATGAAA 3604
|||||||| |||||
Sbjct 175660 TCTCAGGTCGTGAAA 175674
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 135505146973040
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