Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_030940.1
Length=32637
Score E
Sequences producing significant alignments: (Bits) Value
seq14927 118 2e-22
>seq14927
Length=58641
Score = 118 bits (130), Expect = 2e-22
Identities = 459/706 (65%), Gaps = 38/706 (5%)
Strand=Plus/Minus
Query 12486 GCAGCGCTCCAGGTCGGCCAAGGCGAATGCAGCCTGGGTGCT-GTCGATGAACTTGCACA 12544
|||||| | ||| ||||| || | ||| | | | | || | ||| | |||| |||||
Sbjct 43625 GCAGCGTTGCAGCTCGGCGAACGGGAACACGGAC-GCCTGATCGTCAACAAACTCGCACA 43567
Query 12545 TGAACAGCTGTTCGAAGCGCTCTTCGTCGTACTCCAGCTGCAGGCGCTCCAGGTCGAACA 12604
||||||| | ||| ||| || || |||| | | ||| || | || |||||
Sbjct 43566 TGAACAGATTGCGGAAATCCTCCGCGCTGTTCTCCTGTTTCAGCGTGTCGATGTTGAACA 43507
Query 12605 GGTTGCAGCCGCCGGCGATGGCGTCTTGAATCGTGATGACCTTGCGCCACTGCCCGTCCG 12664
|||||||||| ||||| | || || | ||| |||| || | |||||||| |||||
Sbjct 43506 GGTTGCAGCCACCGGCTAACGCATCCTCAATGGTGACGATTTGCCGCCACTGTCCGTCGC 43447
Query 12665 GGCACAACG-------CGCC--GGCGTGGAT--CTGCGCTTC-GCTGGGCCACGGCCCGG 12712
||| | | |||| |||||| || ||| | | ||| | | | |
Sbjct 43446 CGCAAAGCTGCCCTTTCGCCAGGGCGTG-ATGGCTGATATCCAGCTCAATCCTGTCATTG 43388
Query 12713 CCTTCTTTCCGCGCTTGCTGTTGCGGAACTCCTCGCCGGTCCAGTACGGATATGCCTGGT 12772
| |||| ||| | | ||||| ||| || || | |||| ||||||| || ||
Sbjct 43387 CGATCTTCCCGTCCCT--TGTTG---AACAGTTCTCCTGACCAGAACGGATACGCGCCGT 43333
Query 12773 GCGTTACCGCGCTG--GGCGTGGAGAAGTAGGTCAGGCGCCACTTTGCATGCGAGGCCAT 12830
|||| | | |||| || |||||||| ||||| |||| | | | ||||| |||||
Sbjct 43332 GCGTCA--GTGCTGACGGGGTGGAGAAATAGGTGGTGCGCAGATGTTCCTGCGACGCCAT 43275
Query 12831 CGCGCTGGCCACCGTCTGCAGCTTCTGGAAATTGGGGATCCAGAACACTTCGTCGATGTA 12890
||||||| ||| | |||||||||||||||| |||||||| || | |||||| | |||
Sbjct 43274 GCCGCTGGCAACCTTGCGCAGCTTCTGGAAATTCGGGATCCAAAAGATTTCGTCCACGTA 43215
Query 12891 GACGTGGCCGTGGTAGCTCTGCGCCGTGTTGCTGTTCGT-CGAGAGAAACCGCAGTTCCG 12949
| || ||| | | ||| || || |||||| ||| || | ||||| ||| | |
Sbjct 43214 CAGGTCGCCATTATGGCTTTGGGCGGTGTTGGAGTTGGTGCCTAAGAAA-ATCAGCTTTG 43156
Query 12950 CCCACGGCTTGCCGTCTTTGCTCAAGATGATGGGATTGCCGGACAGCTCGATATCGAACC 13009
| ||||| |||| | | || || | || | |||||| | ||| ||||
Sbjct 43155 C---------GCCGTTGTTGCCGATCACAATCGGGTCACCCGTCAGCTCAACATC-AACC 43106
Query 13010 ATTGCGCGGCGAAGGCGACGATGTAGCTGCGGAACACTTCGGACTGGGCGCGGCTCGCGG 13069
| ||| ||| || | |||||| || ||||| | | ||| | || || |
Sbjct 43105 -TGGCG-GGCAAACTGAATGATGTATTCACGAAACACGTAAGCCTGAGTTTTACTGGCTG 43048
Query 13070 ACAGGAAAATCTGGTTGTCCCCGGTCAGCACTGCGTCCATGAACGCTTCGGCGGCGAAGT 13129
|||||||||||||||| | |||||| | ||| || | |||||| ||| |||
Sbjct 43047 ACAGGAAAATCTGGTTATGGCCGGTCGCTAGGGCGCGCAGCAGAGCTTCGCGGGCAAAGA 42988
Query 13130 AGTAGGTCAGCCCGATCTGGCGCGACTTCAGGATATGGCGGATCCG 13175
|| | ||| ||||| || ||||| || || || | |||||| ||
Sbjct 42987 AGAACGTCGCGCCGATTTGTCGCGATTTGAGAATGTCGCGGATACG 42942
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 104231531056492
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |