Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_031007.1
Length=223935
Score E
Sequences producing significant alignments: (Bits) Value
seq35 170 3e-37
>seq35
Length=455554
Score = 170 bits (188), Expect = 3e-37
Identities = 181/239 (76%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 99203 GACCGTACGGGAACCGGTACCCTGTCTATTTTCGGGCACCAGATGCGTTTCAATCTGCAA 99262
|||||||| || || || || |||| ||||| || || |||||||||||||| ||||
Sbjct 112185 GACCGTACCGGTACGGGCACGTTGTCGATTTTTGGTCATCAGATGCGTTTCAACTTGCAG 112244
Query 99263 GAAGGCTTTCCGCTGGTAACGACTAAGCGCTGTCACATGCGTTCGATTATTCACGAACTG 99322
||||| || |||||||| ||||| || ||||| || | || || |||||||| |||||
Sbjct 112245 GAAGGTTTCCCGCTGGTCACGACCAAACGCTGCCATTTACGCTCCATTATTCATGAACTC 112304
Query 99323 CTGTGGTTCCTGAAAGGCGATACCAATGTCAAATATTTAAATGATAATGGTGTAACTATT 99382
|||||||||||||||||||| || || | ||| | ||| || ||| | ||
Sbjct 112305 CTGTGGTTCCTGAAAGGCGAAACTAACATTGCTTATCTGCGTGAAAACAATGTCAGCATC 112364
Query 99383 TGGGACGAATGGAAGAACAAAGATGGCGACCTCGGACCGGTATACGGTAAACAGTGGCG 99441
|||||||| ||| || || | ||||||||||||||||| ||||| || || |||||
Sbjct 112365 TGGGACGAGTGGGCTGACGAAAACGGCGACCTCGGACCGGTTTACGGCAAGCAATGGCG 112423
Score = 140 bits (154), Expect = 5e-28
Identities = 231/331 (70%), Gaps = 2/331 (1%)
Strand=Plus/Plus
Query 99845 GACCGTCAGTTATCGTGTCAGCTTTATCAACGCAGCGCCGATGTGTTCTTAGGGGTGCCG 99904
||| || | || || || ||||| || || ||| |||| | ||| | || |||||
Sbjct 112593 GACGGTAAATTGTCCTGCCAGCTGTACCAGCGCTCATGCGATATCTTCCTCGGCTTGCCG 112652
Query 99905 TTTAATATTGCGTCATACGCTTTGTTGATCCACATGTTTGCACAGCAG-GCTAACATGAC 99963
|| ||||| || ||||| || || | || ||| | || || || || | | |||
Sbjct 112653 TTCAATATCGCCAGCTACGCACTGCTGGTGCATATGATGGCGCAACAATGCGACCTTGAA 112712
Query 99964 CGTGGGTGATTTCGTCTGGTCTGGTGGTGACGTACATCTGTACAATAACCATCTGGAACA 100023
||||||||||| |||||| | ||||| || || ||||||| ||||| |||||||
Sbjct 112713 -GTGGGTGATTTTGTCTGGACGGGTGGCGATACGCACCTGTACAGCAACCACATGGAACA 112771
Query 100024 AACCCGTACCCAGTTAGGTCGTGCCCCGCGTCCGTTACCTAAGCTGATTATCAAACGTAA 100083
|| | | || | | |||| || ||| |||| || || || | || || || ||
Sbjct 112772 GACGCATCTGCAACTGAGCCGTGAACCCCGTGCGTTGCCAAAACTTGTCATTAAGCGCAA 112831
Query 100084 GCCAGACTCCATCTTCGAATATAAGTTTGAAGACTTCGAACTTGAAGGCTACGACCCGCA 100143
|| | |||| | || || || || || ||||| ||||| ||||||| ||||| |||||
Sbjct 112832 ACCGGCCTCCTTGTTTGATTACAACTTCGAAGATTTCGAGATTGAAGGGTACGATCCGCA 112891
Query 100144 TCCTGCAATCAAAGCACCGGTCGCGATATGA 100174
||||||||||| ||||| ||||| || |||
Sbjct 112892 CCCTGCAATCAAGGCACCTGTCGCTATCTGA 112922
Score = 91.5 bits (100), Expect = 2e-13
Identities = 86/110 (78%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 99596 GACCAGTTGAAAAACGACCCGGATAACCGTCGTATCATCGTGTCGGCATGGAACGTAGCT 99655
|| ||| |||| || ||||| || |||||||| |||||||| ||||||||||| |
Sbjct 112476 GAACAGCTGAAGAAAGACCCTGACTCGCGTCGTATTATCGTGTCTGCATGGAACGTGGGC 112535
Query 99656 GACCTCGACGAAATGGCTTTAGCACCGTGCCACGCATTCTTCCAGTTCTA 99705
|| || || | ||||| | ||||| |||||||| ||||||||||||||
Sbjct 112536 GAACTGGATAAGATGGCGCTGGCACCTTGCCACGCTTTCTTCCAGTTCTA 112585
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 715847536462800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |