Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_031020.1 Length=163201 Score E Sequences producing significant alignments: (Bits) Value seq828 141 1e-28 seq725 116 4e-21 >seq828 Length=218660 Score = 141 bits (156), Expect = 1e-28 Identities = 159/213 (75%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 52716 TTCAGTAAATGTACGAGAAATTACATCACGCTGTTGTTCTTTGGTCAGGGAGTTAAAGCG 52775 |||||| || ||||| | ||| || |||||||| ||||| ||||| ||||| || || Sbjct 42140 TTCAGTGAAAGTACGGGTAATCACGTCACGCTGCTGTTCAGCAGTCAGTGAGTTGAAACG 42199 Query 52776 AACAGCATAACCAGAAACACGGATAGTCAACTGTGGGTATTTTGTAGGGTCTTCCATCGC 52835 || ||||| ||||| ||||| ||||||| |||||||||||| ||| | || | ||| Sbjct 42200 TACCGCATAGCCAGACACACGAATAGTCAGCTGTGGGTATTTCTCAGGATGTTTAACCGC 42259 Query 52836 TTCAAGCAACATTTCACGATTCATTACGTTAACGTTCAGGTGCTGACCGCCTTCGACACG 52895 || || |||||||| || |||||||||||||||||||||||| ||||| || || Sbjct 42260 ATCTTCCAGTGTTTCACGACGCAGTACGTTAACGTTCAGGTGCTGACCACCTTCCACGCG 42319 Query 52896 ------AGGCTGAACTGCGATATCAACTTCACG 52922 ||||||||| | || |||||||| Sbjct 42320 CACGGTCGGCTGAACTTCCATTGGCACTTCACG 42352 >seq725 Length=236385 Score = 116 bits (128), Expect = 4e-21 Identities = 75/82 (91%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 66401 AATGGCACACCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGTTGCTCTAT 66460 ||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 175433 AATGGTACGCCCTACAGGGCTCGAACCTGTGACCTACGGCTTAGAAGGCCGTTGCTCTAT 175374 Query 66461 CCAGCTGAGCTAAGAGTGCATT 66482 ||| |||||||||| | ||||| Sbjct 175373 CCAACTGAGCTAAGGGCGCATT 175352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521665959029040