Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_031043.1
Length=229501
Score E
Sequences producing significant alignments: (Bits) Value
seq35 199 6e-46
>seq35
Length=455554
Score = 199 bits (220), Expect = 6e-46
Identities = 224/300 (75%), Gaps = 0/300 (0%)
Strand=Plus/Plus
Query 99464 TAGCATGAAACAATATTTGGAATTAATGAGTAAGGTTTTAAATGAAGGCGTTGTTAAAGG 99523
|| ||||||||| ||| |||| |||||| || || | |||| ||| |||||
Sbjct 112124 TAACATGAAACAGTATCTGGATTTAATGCAGAAAGTGCTCGATGAGGGCACCCCTAAAGC 112183
Query 99524 CGACCGTACTGGCACTGGTACGTTGTCTCTGTTTGGGCATCAAATGCGTTTTAATTTGGC 99583
||||||||| || || || |||||||| | ||||| ||||| |||||||| || |||
Sbjct 112184 CGACCGTACCGGTACGGGCACGTTGTCGATTTTTGGTCATCAGATGCGTTTCAACTTGCA 112243
Query 99584 TGAAGGTTTTCCTCTGGTCACTACTAAGCGCTGTCACCTCCGTTCTATTATTCATGAACT 99643
|||||||| || |||||||| || || ||||| || | || || ||||||||||||||
Sbjct 112244 GGAAGGTTTCCCGCTGGTCACGACCAAACGCTGCCATTTACGCTCCATTATTCATGAACT 112303
Query 99644 CCTTTGGTTCCTGAAAGGGGATACCAATACCCAGTACCTGAAAGATAACGGCGTCACTAT 99703
||| |||||||||||||| || || || | || ||| || ||| |||| ||
Sbjct 112304 CCTGTGGTTCCTGAAAGGCGAAACTAACATTGCTTATCTGCGTGAAAACAATGTCAGCAT 112363
Query 99704 CTGGAATGAGTGGGAAAACGAGAACGGTGACTTAGGACCGGTATACGGAAAGCAGTGGCG 99763
|||| | ||||||| |||| ||||| ||| | |||||||| ||||| ||||| |||||
Sbjct 112364 CTGGGACGAGTGGGCTGACGAAAACGGCGACCTCGGACCGGTTTACGGCAAGCAATGGCG 112423
Score = 127 bits (140), Expect = 3e-24
Identities = 224/324 (69%), Gaps = 2/324 (1%)
Strand=Plus/Plus
Query 100168 TGTCCTGTCAACTCTACCAACG-TAGCGCGGACGTGTTCTTAGGTGTGCCGTTCAATATC 100226
||||||| || || ||||| || | ||| | | ||| | || ||||||||||||||
Sbjct 112603 TGTCCTGCCAGCTGTACCAGCGCTCATGCG-ATATCTTCCTCGGCTTGCCGTTCAATATC 112661
Query 100227 GCGTCGTACGCTCTGCTGGTTCACATGTTTGCACAACAAGCCAACATGGCCGTGGGCGAC 100286
|| ||||| |||||||| || ||| | || |||||| | || | | ||||| ||
Sbjct 112662 GCCAGCTACGCACTGCTGGTGCATATGATGGCGCAACAATGCGACCTTGAAGTGGGTGAT 112721
Query 100287 TTCGTCTGGACGGGTGGTGACGTACATCTGTATTCCAACCATCTGGAACAGACACGTACT 100346
|| |||||||||||||| || || ||||| |||||| |||||||||| | |
Sbjct 112722 TTTGTCTGGACGGGTGGCGATACGCACCTGTACAGCAACCACATGGAACAGACGCATCTG 112781
Query 100347 CAGCTAGGACGCACTCCGCGCACATTACCTAAATTGGTTATCAACCGTAAGCCTGACTCT 100406
|| || | || || || | || || ||| | || || || || || || | |||
Sbjct 112782 CAACTGAGCCGTGAACCCCGTGCGTTGCCAAAACTTGTCATTAAGCGCAAACCGGCCTCC 112841
Query 100407 ATCTTCGACTATAAGTTTGAAGACTTCGAGATTGAGGACTACGAGCCTTACCCCGCCATT 100466
| || || || || || ||||| ||||||||||| | ||||| || |||| || ||
Sbjct 112842 TTGTTTGATTACAACTTCGAAGATTTCGAGATTGAAGGGTACGATCCGCACCCTGCAATC 112901
Query 100467 AAAGCGCCGGTGGCGATATGAACC 100490
|| || || || || || ||| ||
Sbjct 112902 AAGGCACCTGTCGCTATCTGATCC 112925
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 733643411261040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |