Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_031043.1 Length=229501 Score E Sequences producing significant alignments: (Bits) Value seq35 199 6e-46 >seq35 Length=455554 Score = 199 bits (220), Expect = 6e-46 Identities = 224/300 (75%), Gaps = 0/300 (0%) Strand=Plus/Plus Query 99464 TAGCATGAAACAATATTTGGAATTAATGAGTAAGGTTTTAAATGAAGGCGTTGTTAAAGG 99523 || ||||||||| ||| |||| |||||| || || | |||| ||| ||||| Sbjct 112124 TAACATGAAACAGTATCTGGATTTAATGCAGAAAGTGCTCGATGAGGGCACCCCTAAAGC 112183 Query 99524 CGACCGTACTGGCACTGGTACGTTGTCTCTGTTTGGGCATCAAATGCGTTTTAATTTGGC 99583 ||||||||| || || || |||||||| | ||||| ||||| |||||||| || ||| Sbjct 112184 CGACCGTACCGGTACGGGCACGTTGTCGATTTTTGGTCATCAGATGCGTTTCAACTTGCA 112243 Query 99584 TGAAGGTTTTCCTCTGGTCACTACTAAGCGCTGTCACCTCCGTTCTATTATTCATGAACT 99643 |||||||| || |||||||| || || ||||| || | || || |||||||||||||| Sbjct 112244 GGAAGGTTTCCCGCTGGTCACGACCAAACGCTGCCATTTACGCTCCATTATTCATGAACT 112303 Query 99644 CCTTTGGTTCCTGAAAGGGGATACCAATACCCAGTACCTGAAAGATAACGGCGTCACTAT 99703 ||| |||||||||||||| || || || | || ||| || ||| |||| || Sbjct 112304 CCTGTGGTTCCTGAAAGGCGAAACTAACATTGCTTATCTGCGTGAAAACAATGTCAGCAT 112363 Query 99704 CTGGAATGAGTGGGAAAACGAGAACGGTGACTTAGGACCGGTATACGGAAAGCAGTGGCG 99763 |||| | ||||||| |||| ||||| ||| | |||||||| ||||| ||||| ||||| Sbjct 112364 CTGGGACGAGTGGGCTGACGAAAACGGCGACCTCGGACCGGTTTACGGCAAGCAATGGCG 112423 Score = 127 bits (140), Expect = 3e-24 Identities = 224/324 (69%), Gaps = 2/324 (1%) Strand=Plus/Plus Query 100168 TGTCCTGTCAACTCTACCAACG-TAGCGCGGACGTGTTCTTAGGTGTGCCGTTCAATATC 100226 ||||||| || || ||||| || | ||| | | ||| | || |||||||||||||| Sbjct 112603 TGTCCTGCCAGCTGTACCAGCGCTCATGCG-ATATCTTCCTCGGCTTGCCGTTCAATATC 112661 Query 100227 GCGTCGTACGCTCTGCTGGTTCACATGTTTGCACAACAAGCCAACATGGCCGTGGGCGAC 100286 || ||||| |||||||| || ||| | || |||||| | || | | ||||| || Sbjct 112662 GCCAGCTACGCACTGCTGGTGCATATGATGGCGCAACAATGCGACCTTGAAGTGGGTGAT 112721 Query 100287 TTCGTCTGGACGGGTGGTGACGTACATCTGTATTCCAACCATCTGGAACAGACACGTACT 100346 || |||||||||||||| || || ||||| |||||| |||||||||| | | Sbjct 112722 TTTGTCTGGACGGGTGGCGATACGCACCTGTACAGCAACCACATGGAACAGACGCATCTG 112781 Query 100347 CAGCTAGGACGCACTCCGCGCACATTACCTAAATTGGTTATCAACCGTAAGCCTGACTCT 100406 || || | || || || | || || ||| | || || || || || || | ||| Sbjct 112782 CAACTGAGCCGTGAACCCCGTGCGTTGCCAAAACTTGTCATTAAGCGCAAACCGGCCTCC 112841 Query 100407 ATCTTCGACTATAAGTTTGAAGACTTCGAGATTGAGGACTACGAGCCTTACCCCGCCATT 100466 | || || || || || ||||| ||||||||||| | ||||| || |||| || || Sbjct 112842 TTGTTTGATTACAACTTCGAAGATTTCGAGATTGAAGGGTACGATCCGCACCCTGCAATC 112901 Query 100467 AAAGCGCCGGTGGCGATATGAACC 100490 || || || || || || ||| || Sbjct 112902 AAGGCACCTGTCGCTATCTGATCC 112925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 733643411261040