Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_031050.1 Length=51802 Score E Sequences producing significant alignments: (Bits) Value seq9360 113 1e-20 seq725 95.1 4e-15 >seq9360 Length=49093 Score = 113 bits (124), Expect = 1e-20 Identities = 116/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 22861 GGCGGCTACACTGGCGACGGCGGCAAGTATGCGCCAGCGGGCGTGGTTCACCGTGGCGAG 22920 |||||||| || || ||||||||||||||| ||| || || || ||||||||||| || Sbjct 34900 GGCGGCTATACCGGGCACGGCGGCAAGTATGAGCCTGCCGGTGTTGTTCACCGTGGAGAA 34841 Query 22921 TTCGTTATGACGAAGGAGGCAACGAAGAGAATCGGTGTTGATAATCTTTACCGAATGATG 22980 || ||| | || || || |||| | |||||||||| |||||| || || ||||| Sbjct 34840 TTTGTTTTCACAAAAGAATCAACCAGCCGAATCGGTGTAACTAATCTCTATCGTCTGATG 34781 Query 22981 CGCGGCTATGCTTCTGGAGGTCTGGTTGGTGG 23012 ||||| ||||| | || |||||||| || || Sbjct 34780 CGCGGTTATGCCACGGGCGGTCTGGTGGGCGG 34749 >seq725 Length=236385 Score = 95.1 bits (104), Expect = 4e-15 Identities = 112/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 22861 GGCGGCTACACTGGCGACGGCGGCAAGTATGCGCCAGCGGGCGTGGTTCACCGTGGCGAG 22920 || ||||| || ||||| |||| |||| |||||||| || | ||||| || ||||| Sbjct 209379 GGTGGCTATACCGGCGAAGGCGATAAGTTCGCGCCAGCCGGTATCGTTCATCGCGGCGAA 209438 Query 22921 TTCGTTATGACGAAGGAGGCAACGAAGAGAATCGGTGTTGATAATCTTTACCGAATGATG 22980 ||||| ||||| |||||||| || | | ||||| || ||||| || || |||||| Sbjct 209439 TTCGTCATGACCAAGGAGGCGACCAGCCGGATCGGCGTCGATAACCTGTATTCCATGATG 209498 Query 22981 CGCGGCTATGCTTCTGGAGGTCTGGTTGGTGG 23012 | || ||||| || ||||||||||| || Sbjct 209499 AGGGGTTATGCAGACGGCGGTCTGGTTGGCGG 209530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 165509401319312