Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_031074.1 Length=92580 Score E Sequences producing significant alignments: (Bits) Value seq35 141 5e-29 seq15718 87.8 1e-12 >seq35 Length=455554 Score = 141 bits (156), Expect = 5e-29 Identities = 367/557 (66%), Gaps = 12/557 (2%) Strand=Plus/Plus Query 896 GAGGGCTTCCCGCTGGTCACCACGAAGCGCGTCCACTTCAAATCGGTTGCGTACGAACTT 955 || || |||||||||||||| || || ||| ||| || || || | ||||| Sbjct 112245 GAAGGTTTCCCGCTGGTCACGACCAAACGCTGCCATTTACGCTCCATTATTCATGAACTC 112304 Query 956 CTGTGGTTCCTCAGTGGCGACACGAACGTGAAGGCGCTCAACGACAACGGCGTCACCATC 1015 ||||||||||| | ||||| || ||| | || || ||| |||| |||| Sbjct 112305 CTGTGGTTCCTGAAAGGCGAAACTAACATTGCTTATCTGCGTGAAAACAATGTCAGCATC 112364 Query 1016 TGGGACGAGTGGGCCGACGCCGGCGGAAACCTCGGTCCTGTCTACGGCGCGCAGTGGCGG 1075 |||||||||||||| |||| ||| ||||||| || || |||||| ||| ||||| Sbjct 112365 TGGGACGAGTGGGCTGACGAAAACGGCGACCTCGGACCGGTTTACGGCAAGCAATGGCGT 112424 Query 1076 CACTGGCATGTCGAGGACGG--AGGATCGTCGTGGATTGACCAGATCTCGGCCGCCGTGG 1133 |||| || | ||||| || | || |||||| | | | || | Sbjct 112425 GCCTGGGGTGCGGCTGACGGCAAGCAA--------ATCGACCAGCTGGCAAATGTGGTTG 112476 Query 1134 AGCTGCTTCGCGAGGACCCTGACTCGCGCCGGAACGTGGTATCCGCATGGAACGTCGGTG 1193 | | ||| | |||||||||||||| || | | || || ||||||||||| || | Sbjct 112477 AACAGCTGAAGAAAGACCCTGACTCGCGTCGTATTATCGTGTCTGCATGGAACGTGGGCG 112536 Query 1194 ACCTCAGCGACATGGCACTTCACCCGTGCCACATCATGTTCCAGCTGTACGTCGTCGACG 1253 | || | ||||| || || |||||| | |||||| | || || | ||||| Sbjct 112537 AACTGGATAAGATGGCGCTGGCACCTTGCCACGCTTTCTTCCAGTTCTATGTGGCCGACG 112596 Query 1254 GCCGGCTCTCGCTGC-AGGTCTACCAGCGCAGCGCGGACATGTTCCTCGGTGTGCCGTTC 1312 | | || |||| || | ||||||||| || || |||||||| |||||||| Sbjct 112597 GTAAATTGTC-CTGCCAGCTGTACCAGCGCTCATGCGATATCTTCCTCGGCTTGCCGTTC 112655 Query 1313 AATATCGCCTCGTACGCGCTCCTCGCGCACATGTTCGCGCAGCAGGCCGGCCTGCGGGTG 1372 ||||||||| ||||| || || | ||| ||| | ||||| || || ||| ||| Sbjct 112656 AATATCGCCAGCTACGCACTGCTGGTGCATATGATGGCGCAACAATGCGACCTTGAAGTG 112715 Query 1373 GGTGAGCTGATCTGGACCGGCGGCGACTGCCACATCTACAACAACCACGTCGACCAGGCG 1432 ||||| | ||||||| || ||||| ||| | |||| ||||||| | || ||| || Sbjct 112716 GGTGATTTTGTCTGGACGGGTGGCGATACGCACCTGTACAGCAACCACATGGAACAGACG 112775 Query 1433 CTGATGCAGCTCCGCCG 1449 | |||| || |||| Sbjct 112776 CATCTGCAACTGAGCCG 112792 >seq15718 Length=23337 Score = 87.8 bits (96), Expect = 1e-12 Identities = 109/147 (74%), Gaps = 2/147 (1%) Strand=Plus/Minus Query 1205 ATGGCACTTCACCCGTGCCACATCATGTTCCAGCTGTACGTCGTCGACGGCCGGCTCTCG 1264 ||||| || | |||||||||| | || | ||| | ||||| | || || || || || Sbjct 3220 ATGGCCCTGCCCCCGTGCCACTGCCTGGTGCAGTTCTACGTGGCGGAGGGGCGCCTGTC- 3162 Query 1265 CTG-CAGGTCTACCAGCGCAGCGCGGACATGTTCCTCGGTGTGCCGTTCAATATCGCCTC 1323 ||| ||| |||||||||||||||| |||||| ||| || || || ||||| |||||||| Sbjct 3161 CTGTCAGCTCTACCAGCGCAGCGCCGACATGGGCCTGGGAGTCCCTTTCAACATCGCCTC 3102 Query 1324 GTACGCGCTCCTCGCGCACATGTTCGC 1350 || | || || | || ||| |||| Sbjct 3101 CTATTCCCTGCTGACTCATATGATCGC 3075 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 295882771279434