Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_031085.1 Length=166634 Score E Sequences producing significant alignments: (Bits) Value seq828 190 2e-43 seq35 86.0 7e-12 >seq828 Length=218660 Score = 190 bits (210), Expect = 2e-43 Identities = 185/237 (78%), Gaps = 1/237 (0%) Strand=Plus/Plus Query 62741 GCCATTACAAACTCTCAGTAAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCA 62800 || |||||| || ||||| || ||||| | || ||||| ||||||||||| | ||||| Sbjct 42127 GCGATTACAGGCTTTCAGTGAAAGTACGGGTAATCACGTCACGCTGCTGTTCAGCAGTCA 42186 Query 62801 GAGAGTTAAAGCGAACTGCATATCCGGATACACGGATGGTCAGCTGCGGATATTTTTCCG 62860 | ||||| || || || ||||| || || ||||| || |||||||| || ||||| || | Sbjct 42187 GTGAGTTGAAACGTACCGCATAGCCAGACACACGAATAGTCAGCTGTGGGTATTTCTCAG 42246 Query 62861 GATGCTTAACTGCATCTTCCAGAGTTTCACGACGCAGAACGTTTACGTTCAGGTGTTGAC 62920 |||| ||||| ||||||||||| |||||||||||||| ||||| ||||||||||| |||| Sbjct 42247 GATGTTTAACCGCATCTTCCAGTGTTTCACGACGCAGTACGTTAACGTTCAGGTGCTGAC 42306 Query 62921 CACCTTCAATTTTAACTGTAGGCTGTGATTCAATTTCAATTTCACGGGTGTGCAAAC 62977 ||||||| | || || ||||| ||| ||| | ||||| ||| | ||||| Sbjct 42307 CACCTTCCACGCGCACGGTCGGCTGAACTTCCATTGGCACTTCAC-GGTATTCAAAC 42362 >seq35 Length=455554 Score = 86.0 bits (94), Expect = 7e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 70820 TGGTGCTGATTGACGGAATCGAACCGCCGACCTTCTCATTACAAGTGAGTTGCTCTACCT 70879 |||||| || | ||||||||||| | ||||| || ||||||||| ||||||||||||| Sbjct 252486 TGGTGCCGACTACCGGAATCGAACTGGTGACCTACTGATTACAAGTCAGTTGCTCTACCT 252427 Query 70880 ACTGAGCTAAATCAGCA 70896 |||||||||| || ||| Sbjct 252426 ACTGAGCTAAGTCGGCA 252410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 532642106744160