Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_031085.1
Length=166634
Score E
Sequences producing significant alignments: (Bits) Value
seq828 190 2e-43
seq35 86.0 7e-12
>seq828
Length=218660
Score = 190 bits (210), Expect = 2e-43
Identities = 185/237 (78%), Gaps = 1/237 (0%)
Strand=Plus/Plus
Query 62741 GCCATTACAAACTCTCAGTAAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCA 62800
|| |||||| || ||||| || ||||| | || ||||| ||||||||||| | |||||
Sbjct 42127 GCGATTACAGGCTTTCAGTGAAAGTACGGGTAATCACGTCACGCTGCTGTTCAGCAGTCA 42186
Query 62801 GAGAGTTAAAGCGAACTGCATATCCGGATACACGGATGGTCAGCTGCGGATATTTTTCCG 62860
| ||||| || || || ||||| || || ||||| || |||||||| || ||||| || |
Sbjct 42187 GTGAGTTGAAACGTACCGCATAGCCAGACACACGAATAGTCAGCTGTGGGTATTTCTCAG 42246
Query 62861 GATGCTTAACTGCATCTTCCAGAGTTTCACGACGCAGAACGTTTACGTTCAGGTGTTGAC 62920
|||| ||||| ||||||||||| |||||||||||||| ||||| ||||||||||| ||||
Sbjct 42247 GATGTTTAACCGCATCTTCCAGTGTTTCACGACGCAGTACGTTAACGTTCAGGTGCTGAC 42306
Query 62921 CACCTTCAATTTTAACTGTAGGCTGTGATTCAATTTCAATTTCACGGGTGTGCAAAC 62977
||||||| | || || ||||| ||| ||| | ||||| ||| | |||||
Sbjct 42307 CACCTTCCACGCGCACGGTCGGCTGAACTTCCATTGGCACTTCAC-GGTATTCAAAC 42362
>seq35
Length=455554
Score = 86.0 bits (94), Expect = 7e-12
Identities = 65/77 (84%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 70820 TGGTGCTGATTGACGGAATCGAACCGCCGACCTTCTCATTACAAGTGAGTTGCTCTACCT 70879
|||||| || | ||||||||||| | ||||| || ||||||||| |||||||||||||
Sbjct 252486 TGGTGCCGACTACCGGAATCGAACTGGTGACCTACTGATTACAAGTCAGTTGCTCTACCT 252427
Query 70880 ACTGAGCTAAATCAGCA 70896
|||||||||| || |||
Sbjct 252426 ACTGAGCTAAGTCGGCA 252410
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 532642106744160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |