Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_031087.1 Length=168272 Score E Sequences producing significant alignments: (Bits) Value seq828 179 4e-40 >seq828 Length=218660 Score = 179 bits (198), Expect = 4e-40 Identities = 167/212 (79%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 60000 TCTGTGAAAGTACGGGCGATAACGTCGCGCTGCTGTTCTGGTGTCAGGGAGTTAAAGCGC 60059 || ||||||||||||| || ||||| ||||||||||| | ||||| ||||| || || Sbjct 42141 TCAGTGAAAGTACGGGTAATCACGTCACGCTGCTGTTCAGCAGTCAGTGAGTTGAAACGT 42200 Query 60060 ACCGCGTAGCCGGAAACACGAATGGTAAGCTGCGGGTATTTTTCCGGATGCTCAACCGCG 60119 ||||| ||||| || |||||||| || ||||| |||||||| || ||||| | |||||| Sbjct 42201 ACCGCATAGCCAGACACACGAATAGTCAGCTGTGGGTATTTCTCAGGATGTTTAACCGCA 42260 Query 60120 TCCAGCAGAGTTTCGCGACGCAGCACGTTAACGTTCAGGTGCTGACCGCCTTCAATTTTT 60179 || ||| ||||| |||||||| ||||||||||||||||||||||| ||||| | Sbjct 42261 TCTTCCAGTGTTTCACGACGCAGTACGTTAACGTTCAGGTGCTGACCACCTTCCACGCGC 42320 Query 60180 ACCGTTGGCTGGTATTCAATTTCTACTTCACG 60211 || || ||||| ||| ||| |||||||| Sbjct 42321 ACGGTCGGCTGAACTTCCATTGGCACTTCACG 42352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 537879196740480