Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_031091.1
Length=43277
Score E
Sequences producing significant alignments: (Bits) Value
seq9360 233 5e-57
>seq9360
Length=49093
Score = 233 bits (258), Expect = 5e-57
Identities = 358/508 (70%), Gaps = 2/508 (0%)
Strand=Plus/Minus
Query 5436 GAGCGCCAGGCTGATAACGCCTACAACGGCATGACGCTCCGCGAACTGGCCCGTGCCTCG 5495
|| |||||| || |||| || ||||||||||| || |||||| || || |||
Sbjct 42296 GACCGCCAGAACGACAACGTGTATAACGGCATGACCCTGCGCGAATATGCGCGCATGTCG 42237
Query 5496 CTGGTCGATCGCGGGATCGGCGTGGCCTCGCTCAACGCGCCGCAAATGGTCGGCTTGGCC 5555
||| ||| |||||| | ||||| || | ||| || ||| ||||| || ||||
Sbjct 42236 CTGACCGAGCGCGGGGTGGGCGTTGCGGCTTATAACCCGATGCAGATGGTGGGACTGGCG 42177
Query 5556 TTCACCCACACTTCCAGCGACTTCGGCCTGATCCTTCTGGATGTCGCCAACAAGTCGGTG 5615
| || ||||| || || || ||| || || |||||||| || ||||| || |
Sbjct 42176 ATGACGCACACCACCTCTGATTTTGGCAATATTCTGCTGGATGTGGCGAACAAATCTCTA 42117
Query 5616 CTGGCTGGCTGGGAAGAGGCCGAAGAAACCTTCCCGCTGTGGACCAAGCCCGGCATTCTC 5675
||| |||||||||||| | | || || || ||||| ||| || |||
Sbjct 42116 CTGCAAGGCTGGGAAGAGTCACAGGAGACATTTGAAGCCTGGACGAAGAAAGGGCAGCTC 42057
Query 5676 ACTGACTTCAAGCCGGCGCGCCGCGTCGGGCTGGGCGAGTTTTCCTCGCTGCGTCAAGTG 5735
||||||| || |||||| ||||||||||||||||| || | || |||||| | ||
Sbjct 42056 TCTGACTTTAAAACGGCGCACCGCGTCGGGCTGGGCGGCTTCCCGTCACTGCGTAAGGTA 41997
Query 5736 CGTGAGGGCGCCGAGTACAAGTACGTCACCCTCGGC-GAGCGCGGCGAACAGATCATCCT 5794
|| || || || || ||||| |||||||| || | || | | ||| || ||
Sbjct 41996 CGCGAAGGGGCGGAATACAAATACGTCACGA-CGACAGATAACAGTGAAACCATTGCGCT 41938
Query 5795 GGCCACCTACGGAGAGCTGTTCAGCATCACCCGTCAGGCGATCATCAACGACGACCTGCA 5854
|||||||||||| || | ||| ||| ||||||||||| || ||||||||||| ||| |
Sbjct 41937 GGCCACCTACGGTGAAATTTTCTCCATTACCCGTCAGGCCATTATCAACGACGATCTGAA 41878
Query 5855 GATGCTCTCGGATATCCCGTTCAAGCTGGGCCAGGCTGCCAAGGCCACCATCGGCGACCT 5914
||| | ||| ||||| | ||| |||||| || || || |||||||||||||| ||
Sbjct 41877 CCAGCTGACCGATGTCCCGATGAAGATGGGCCGCGCCGCAAAAGCCACCATCGGCGATCT 41818
Query 5915 GGTCTATGCGGTTCTGACCGGTAACCCG 5942
||| ||||| || |||||||||||||||
Sbjct 41817 GGTGTATGCCGTGCTGACCGGTAACCCG 41790
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 138251700093612
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |