Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_031091.1 Length=43277 Score E Sequences producing significant alignments: (Bits) Value seq9360 233 5e-57 >seq9360 Length=49093 Score = 233 bits (258), Expect = 5e-57 Identities = 358/508 (70%), Gaps = 2/508 (0%) Strand=Plus/Minus Query 5436 GAGCGCCAGGCTGATAACGCCTACAACGGCATGACGCTCCGCGAACTGGCCCGTGCCTCG 5495 || |||||| || |||| || ||||||||||| || |||||| || || ||| Sbjct 42296 GACCGCCAGAACGACAACGTGTATAACGGCATGACCCTGCGCGAATATGCGCGCATGTCG 42237 Query 5496 CTGGTCGATCGCGGGATCGGCGTGGCCTCGCTCAACGCGCCGCAAATGGTCGGCTTGGCC 5555 ||| ||| |||||| | ||||| || | ||| || ||| ||||| || |||| Sbjct 42236 CTGACCGAGCGCGGGGTGGGCGTTGCGGCTTATAACCCGATGCAGATGGTGGGACTGGCG 42177 Query 5556 TTCACCCACACTTCCAGCGACTTCGGCCTGATCCTTCTGGATGTCGCCAACAAGTCGGTG 5615 | || ||||| || || || ||| || || |||||||| || ||||| || | Sbjct 42176 ATGACGCACACCACCTCTGATTTTGGCAATATTCTGCTGGATGTGGCGAACAAATCTCTA 42117 Query 5616 CTGGCTGGCTGGGAAGAGGCCGAAGAAACCTTCCCGCTGTGGACCAAGCCCGGCATTCTC 5675 ||| |||||||||||| | | || || || ||||| ||| || ||| Sbjct 42116 CTGCAAGGCTGGGAAGAGTCACAGGAGACATTTGAAGCCTGGACGAAGAAAGGGCAGCTC 42057 Query 5676 ACTGACTTCAAGCCGGCGCGCCGCGTCGGGCTGGGCGAGTTTTCCTCGCTGCGTCAAGTG 5735 ||||||| || |||||| ||||||||||||||||| || | || |||||| | || Sbjct 42056 TCTGACTTTAAAACGGCGCACCGCGTCGGGCTGGGCGGCTTCCCGTCACTGCGTAAGGTA 41997 Query 5736 CGTGAGGGCGCCGAGTACAAGTACGTCACCCTCGGC-GAGCGCGGCGAACAGATCATCCT 5794 || || || || || ||||| |||||||| || | || | | ||| || || Sbjct 41996 CGCGAAGGGGCGGAATACAAATACGTCACGA-CGACAGATAACAGTGAAACCATTGCGCT 41938 Query 5795 GGCCACCTACGGAGAGCTGTTCAGCATCACCCGTCAGGCGATCATCAACGACGACCTGCA 5854 |||||||||||| || | ||| ||| ||||||||||| || ||||||||||| ||| | Sbjct 41937 GGCCACCTACGGTGAAATTTTCTCCATTACCCGTCAGGCCATTATCAACGACGATCTGAA 41878 Query 5855 GATGCTCTCGGATATCCCGTTCAAGCTGGGCCAGGCTGCCAAGGCCACCATCGGCGACCT 5914 ||| | ||| ||||| | ||| |||||| || || || |||||||||||||| || Sbjct 41877 CCAGCTGACCGATGTCCCGATGAAGATGGGCCGCGCCGCAAAAGCCACCATCGGCGATCT 41818 Query 5915 GGTCTATGCGGTTCTGACCGGTAACCCG 5942 ||| ||||| || ||||||||||||||| Sbjct 41817 GGTGTATGCCGTGCTGACCGGTAACCCG 41790 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138251700093612