Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_031095.1 Length=168758 Score E Sequences producing significant alignments: (Bits) Value seq828 167 3e-36 >seq828 Length=218660 Score = 167 bits (184), Expect = 3e-36 Identities = 164/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 47266 CGTGAAGTAGAAATTGAATACCAGCCAACGGTAAAAATTGAAGGCGGTCAGCACCTGAAC 47325 |||||||| ||| ||| ||||| || || | ||||| ||||||||||||||| Sbjct 42352 CGTGAAGTGCCAATGGAAGTTCAGCCGACCGTGCGCGTGGAAGGTGGTCAGCACCTGAAC 42293 Query 47326 GTTAACGTGTTGCGTCGCGAAACCTTGCTGGATGCGGTTGAGCACCCAGAAAAATACCCG 47385 |||||||| ||||||| ||||| || ||||||||| | || || || |||||||| Sbjct 42292 GTTAACGTACTGCGTCGTGAAACACTGGAAGATGCGGTTAAACATCCTGAGAAATACCCA 42233 Query 47386 CAGCTGACTATTCGCGTTTCCGGATACGCGGTGCGCTTCAACTCCTTGACACCAGAACAG 47445 |||||||||||||| || || || || ||||| || |||||||| |||| | |||||| Sbjct 42232 CAGCTGACTATTCGTGTGTCTGGCTATGCGGTACGTTTCAACTCACTGACTGCTGAACAG 42173 Query 47446 CAGCGCGACGTTATCGCTCGTACTTTCACAGA 47477 ||||| ||||| || | ||||||||||| || Sbjct 42172 CAGCGTGACGTGATTACCCGTACTTTCACTGA 42141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 539433058607520