Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_031103.1 Length=165772 Score E Sequences producing significant alignments: (Bits) Value seq828 194 2e-44 seq35 86.0 7e-12 >seq828 Length=218660 Score = 194 bits (214), Expect = 2e-44 Identities = 155/187 (83%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 60303 GCCATTACAGACTCTCAGTAAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCA 60362 || ||||||| || ||||| || ||||| | || ||||| ||||||||||| | ||||| Sbjct 42127 GCGATTACAGGCTTTCAGTGAAAGTACGGGTAATCACGTCACGCTGCTGTTCAGCAGTCA 42186 Query 60363 GAGAGTTAAAGCGAACTGCATAACCGGATACGCGGATGGTCAGCTGCGGATATTTTTCCG 60422 | ||||| || || || ||||| || || || || || |||||||| || ||||| || | Sbjct 42187 GTGAGTTGAAACGTACCGCATAGCCAGACACACGAATAGTCAGCTGTGGGTATTTCTCAG 42246 Query 60423 GATGCTTAACTGCATCTTCCAGAGTTTCACGACGCAGAACGTTAACGTTCAGGTGTTGAC 60482 |||| ||||| ||||||||||| |||||||||||||| ||||||||||||||||| |||| Sbjct 42247 GATGTTTAACCGCATCTTCCAGTGTTTCACGACGCAGTACGTTAACGTTCAGGTGCTGAC 42306 Query 60483 CACCTTC 60489 ||||||| Sbjct 42307 CACCTTC 42313 >seq35 Length=455554 Score = 86.0 bits (94), Expect = 7e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 70145 TGGTGCTGATTGACGGAATCGAACCGCCGACCTTCTCATTACAAGTGAGTTGCTCTACCT 70204 |||||| || | ||||||||||| | ||||| || ||||||||| ||||||||||||| Sbjct 252486 TGGTGCCGACTACCGGAATCGAACTGGTGACCTACTGATTACAAGTCAGTTGCTCTACCT 252427 Query 70205 ACTGAGCTAAATCAGCA 70221 |||||||||| || ||| Sbjct 252426 ACTGAGCTAAGTCGGCA 252410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 529886080140480