Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_031107.1 Length=246291 Score E Sequences producing significant alignments: (Bits) Value seq35 197 2e-45 >seq35 Length=455554 Score = 197 bits (218), Expect = 2e-45 Identities = 226/304 (74%), Gaps = 0/304 (0%) Strand=Plus/Plus Query 201790 CATGAAACAATATCTGGACTTACTGCGTGATGTTCGCGAAAACGGGGATGTAAAAGCCGA 201849 ||||||||| |||||||| ||| ||| | || | ||| | || |||||||| Sbjct 112127 CATGAAACAGTATCTGGATTTAATGCAGAAAGTGCTCGATGAGGGCACCCCTAAAGCCGA 112186 Query 201850 CCGTACCGGTACGGGCACCCTCTCTGTTTTCGGACGCCAGATGCGCTTTAACTTACAAGA 201909 |||||||||||||||||| | || |||| || | |||||||| || ||||| || || Sbjct 112187 CCGTACCGGTACGGGCACGTTGTCGATTTTTGGTCATCAGATGCGTTTCAACTTGCAGGA 112246 Query 201910 AGGTTTTCCGCTGGTCACCACCAAAAAGGTTCACCTTCGTTCAATCATCCATGAGCTGCT 201969 |||||| ||||||||||| |||||| || | || || || || ||||| || || Sbjct 112247 AGGTTTCCCGCTGGTCACGACCAAACGCTGCCATTTACGCTCCATTATTCATGAACTCCT 112306 Query 201970 GTGGTTCCTCATGGGTGACACCAACATCCAGTATTTGAAAGACAACAACGTCACCATCTG 202029 ||||||||| | || || || ||||| ||| || || ||||| |||| |||||| Sbjct 112307 GTGGTTCCTGAAAGGCGAAACTAACATTGCTTATCTGCGTGAAAACAATGTCAGCATCTG 112366 Query 202030 GGACGAATGGGCGGATAAAAACGGTGACTTAGGCCCGGTGTACGGTAAGCAATGGCGTAG 202089 |||||| ||||| || ||||||| ||| | || ||||| ||||| |||||||||||| Sbjct 112367 GGACGAGTGGGCTGACGAAAACGGCGACCTCGGACCGGTTTACGGCAAGCAATGGCGTGC 112426 Query 202090 CTGG 202093 |||| Sbjct 112427 CTGG 112430 Score = 89.7 bits (98), Expect = 8e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 202205 ATTGACCAAATCGCCAAAGTGGTTGACCAGCTGCGTAATGACCCCGACAACCGTCGTATT 202264 || ||||| | || || |||||||| |||||| || ||||| ||| ||||||||| Sbjct 112452 ATCGACCAGCTGGCAAATGTGGTTGAACAGCTGAAGAAAGACCCTGACTCGCGTCGTATT 112511 Query 202265 ATTGTCAGCGCCTGGAACGTGGCAGAGCTAGACGAGATGGCCTTGGCCCCGTGTCATGCG 202324 || || || |||||||||| || || || ||||||| |||| || || || || Sbjct 112512 ATCGTGTCTGCATGGAACGTGGGCGAACTGGATAAGATGGCGCTGGCACCTTGCCACGCT 112571 Query 202325 TTCTTCCAGTTCTA 202338 |||||||||||||| Sbjct 112572 TTCTTCCAGTTCTA 112585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 787325182346640