Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_031107.1
Length=246291
Score E
Sequences producing significant alignments: (Bits) Value
seq35 197 2e-45
>seq35
Length=455554
Score = 197 bits (218), Expect = 2e-45
Identities = 226/304 (74%), Gaps = 0/304 (0%)
Strand=Plus/Plus
Query 201790 CATGAAACAATATCTGGACTTACTGCGTGATGTTCGCGAAAACGGGGATGTAAAAGCCGA 201849
||||||||| |||||||| ||| ||| | || | ||| | || ||||||||
Sbjct 112127 CATGAAACAGTATCTGGATTTAATGCAGAAAGTGCTCGATGAGGGCACCCCTAAAGCCGA 112186
Query 201850 CCGTACCGGTACGGGCACCCTCTCTGTTTTCGGACGCCAGATGCGCTTTAACTTACAAGA 201909
|||||||||||||||||| | || |||| || | |||||||| || ||||| || ||
Sbjct 112187 CCGTACCGGTACGGGCACGTTGTCGATTTTTGGTCATCAGATGCGTTTCAACTTGCAGGA 112246
Query 201910 AGGTTTTCCGCTGGTCACCACCAAAAAGGTTCACCTTCGTTCAATCATCCATGAGCTGCT 201969
|||||| ||||||||||| |||||| || | || || || || ||||| || ||
Sbjct 112247 AGGTTTCCCGCTGGTCACGACCAAACGCTGCCATTTACGCTCCATTATTCATGAACTCCT 112306
Query 201970 GTGGTTCCTCATGGGTGACACCAACATCCAGTATTTGAAAGACAACAACGTCACCATCTG 202029
||||||||| | || || || ||||| ||| || || ||||| |||| ||||||
Sbjct 112307 GTGGTTCCTGAAAGGCGAAACTAACATTGCTTATCTGCGTGAAAACAATGTCAGCATCTG 112366
Query 202030 GGACGAATGGGCGGATAAAAACGGTGACTTAGGCCCGGTGTACGGTAAGCAATGGCGTAG 202089
|||||| ||||| || ||||||| ||| | || ||||| ||||| ||||||||||||
Sbjct 112367 GGACGAGTGGGCTGACGAAAACGGCGACCTCGGACCGGTTTACGGCAAGCAATGGCGTGC 112426
Query 202090 CTGG 202093
||||
Sbjct 112427 CTGG 112430
Score = 89.7 bits (98), Expect = 8e-13
Identities = 100/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 202205 ATTGACCAAATCGCCAAAGTGGTTGACCAGCTGCGTAATGACCCCGACAACCGTCGTATT 202264
|| ||||| | || || |||||||| |||||| || ||||| ||| |||||||||
Sbjct 112452 ATCGACCAGCTGGCAAATGTGGTTGAACAGCTGAAGAAAGACCCTGACTCGCGTCGTATT 112511
Query 202265 ATTGTCAGCGCCTGGAACGTGGCAGAGCTAGACGAGATGGCCTTGGCCCCGTGTCATGCG 202324
|| || || |||||||||| || || || ||||||| |||| || || || ||
Sbjct 112512 ATCGTGTCTGCATGGAACGTGGGCGAACTGGATAAGATGGCGCTGGCACCTTGCCACGCT 112571
Query 202325 TTCTTCCAGTTCTA 202338
||||||||||||||
Sbjct 112572 TTCTTCCAGTTCTA 112585
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 787325182346640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |