Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_031113.1 Length=44513 Score E Sequences producing significant alignments: (Bits) Value seq725 93.3 1e-14 >seq725 Length=236385 Score = 93.3 bits (102), Expect = 1e-14 Identities = 112/152 (74%), Gaps = 3/152 (2%) Strand=Plus/Plus Query 40845 CAATCGAATAACTACGACGGCAGCACGCGCGGCTGGCGCTTAGGGAAAGATGGAACGTTT 40904 || |||||||||| ||||| |||| ||||||| ||| | ||| ||| |||||| Sbjct 217654 CAGTCGAATAACTTTGACGGTTCAACGCAGGGCTGGCAATTAAGTAAATCTGGTACGTTT 217713 Query 40905 ATCAACCTGGGCACCGGTAGCGGC---GGCGGGATGAAACAGACGAACACAAGAATCAGC 40961 |||||||| || | || | ||||| || | |||||||||||||| || | ||||| Sbjct 217714 ATCAACCTTGGGAACGCTGGCGGCGCTGGTGCAATGAAACAGACGAATACCACGATCAGT 217773 Query 40962 GTGAAGGACGGAAACGGCGTTCTCCGCGTGCA 40993 ||||||| ||||| || || |||||||| Sbjct 217774 ACTAAGGACGATAACGGGGTGCTTCGCGTGCA 217805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 142203667098300