Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_031126.1
Length=244840
Score E
Sequences producing significant alignments: (Bits) Value
seq35 136 6e-27
>seq35
Length=455554
Score = 136 bits (150), Expect = 6e-27
Identities = 223/319 (70%), Gaps = 2/319 (1%)
Strand=Plus/Plus
Query 200842 TCCTGTCAGCTGTATCAGCG-TAGCGCTGATATGTTTTTAGGCGTGCCGTTCAACATTGC 200900
||||| |||||||| ||||| | || ||||| || | ||| |||||||||| || ||
Sbjct 112605 TCCTGCCAGCTGTACCAGCGCTCATGC-GATATCTTCCTCGGCTTGCCGTTCAATATCGC 112663
Query 200901 ATCATACGCACTACTGATTCACATGGTAGCCCAACAGGTCAATATGACTGTCGGTGATTT 200960
|||||||| ||| | || ||| | || ||||| | | | || ||||||||
Sbjct 112664 CAGCTACGCACTGCTGGTGCATATGATGGCGCAACAATGCGACCTTGAAGTGGGTGATTT 112723
Query 200961 CGTATGGACGGGTGGTGACGTACACATCTACAGCAATCACGAAGAGCAGGTTCGTCTGCA 201020
|| ||||||||||| || ||| | |||||||| ||| || ||| | ||||||
Sbjct 112724 TGTCTGGACGGGTGGCGATACGCACCTGTACAGCAACCACATGGAACAGACGCATCTGCA 112783
Query 201021 ACTGTCTCGTGATCCGCGTCCTTTACCGAAGTTGAAAATTCTTCGTAAGCCGGACTCTAT 201080
|||| ||||| || ||| | || || || | ||| || || |||| ||| |
Sbjct 112784 ACTGAGCCGTGAACCCCGTGCGTTGCCAAAACTTGTCATTAAGCGCAAACCGGCCTCCTT 112843
Query 201081 CTTCGATTACAAGTTCGAAGACTTTGAGCTTACTGGTTACGAACCGCATCCTGCGATAAA 201140
|| |||||||| |||||||| || ||| || || ||||| ||||| ||||| || ||
Sbjct 112844 GTTTGATTACAACTTCGAAGATTTCGAGATTGAAGGGTACGATCCGCACCCTGCAATCAA 112903
Query 201141 AGCACCGGTGGCGATATGA 201159
||||| || || || |||
Sbjct 112904 GGCACCTGTCGCTATCTGA 112922
Score = 120 bits (132), Expect = 5e-22
Identities = 142/194 (73%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 200098 GACCGTACCGGTANNNNNACCACGTCTATTTTCGGTGCACAGATGCGCTTCAATCTACAA 200157
||||||||||||| || ||| ||||| ||| |||||||| ||||| | ||
Sbjct 112185 GACCGTACCGGTACGGGCACGTTGTCGATTTTTGGTCATCAGATGCGTTTCAACTTGCAG 112244
Query 200158 GACGGCTTCCCATTGGTGACGACCAAGAAGTGCCATCTCCGTTCCATCATTCACGAGCTG 200217
|| || ||||| |||| |||||||| |||||| | || ||||| ||||| || ||
Sbjct 112245 GAAGGTTTCCCGCTGGTCACGACCAAACGCTGCCATTTACGCTCCATTATTCATGAACTC 112304
Query 200218 TTGTGGTTCCTTAACGGTGACACCAATATCAAGTATCTGAACGATAACAATGTCACCATT 200277
|||||||||| || || || || || || |||||| || |||||||||| |||
Sbjct 112305 CTGTGGTTCCTGAAAGGCGAAACTAACATTGCTTATCTGCGTGAAAACAATGTCAGCATC 112364
Query 200278 TGGGACGAATGGGC 200291
|||||||| |||||
Sbjct 112365 TGGGACGAGTGGGC 112378
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 782685977472000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |