Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_031129.1
Length=103445
Score E
Sequences producing significant alignments: (Bits) Value
seq223 614 4e-171
seq6488 381 4e-101
seq9046 221 8e-53
seq25848 102 5e-17
seq785 96.9 2e-15
>seq223
Length=511576
Score = 614 bits (680), Expect = 4e-171
Identities = 916/1295 (71%), Gaps = 6/1295 (0%)
Strand=Plus/Plus
Query 96701 TAGTTATCAAACCGTGAGTATTGGCCGTTAAAAGCCAATCTCACCGTGCCAATTGGGCCA 96760
|| |||||||| || || | || |||||||| | || | || || || || |||||
Sbjct 474337 TAATTATCAAATCGCGACCACTGACCGTTAAAGGTCAGGCGGACGGTACCGATCGGGCCG 474396
Query 96761 TTTCGTTGCTTTCCGATAATTACCTCGGCAATGCCCTTCATTTCGCTATCCGGGTGATAA 96820
|| ||||| || |||| || | | || ||||| || ||| || | |||||||
Sbjct 474397 TTACGTTGTTTACCGAGGATGATTTGCGCGATGCCTTTTTCTTCACTGTTATCGTGATAA 474456
Query 96821 ACTTCGTCGCGATACAAAAACATGATCAGGTCTGCGTCCTGCTCAATTGCTCCTGATTCA 96880
|| ||||| ||||| | |||||||| | ||| ||||||||||| || | |||||||||
Sbjct 474457 ACCTCGTCACGATAGATGAACATGATTAAGTCGGCGTCCTGCTCGATGGAACCTGATTCA 474516
Query 96881 CGTAAATCTGAATTTACCGGTCGTTTGTCCGCACGCTGTTCAAGCGATCGATTAAGTTGT 96940
||||| || || || ||||| ||||| || ||||| || || || ||| ||||| ||
Sbjct 474517 CGTAAGTCGGAGTTGACCGGGCGTTTATCGGCACGTTGCTCCAGGCTTCGGTTAAGCTGC 474576
Query 96941 GACAATGCCACCACCGGTACTTGTAATTCCTTCGCCAACGCCTTCAGTGAGCGAGAAATC 97000
|||| ||||||||||| || || ||||| ||||||| ||| || || ||||| || ||
Sbjct 474577 GACAGCGCCACCACCGGCACCTGCAATTCTTTCGCCAGCGCTTTAAGCGAGCGGGAGATT 474636
Query 97001 TCGGCAATTTCCAGCGTTCGGTTATCTTGCAGCTCCGGGACGCGCATAAGTTGCAGGTAG 97060
||||| ||||||||||| |||||||| |||| ||| |||||||| || || || |||
Sbjct 474637 TCGGCGATTTCCAGCGTACGGTTATCGGACAGCGACGGAACGCGCATCAGCTGGAGATAG 474696
Query 97061 TCGATCATAATCATGCTCAAACCACCATTTTCTTTATAAACACGACGAGCGCGGGAACGT 97120
|| ||||| |||| |||| ||| || | ||| | | ||| || ||||| |||||
Sbjct 474697 TCAATCATGATCAGACTCAGACCGCCGTGTTCACGGAAGATACGGCGCGCGCGCGAACGG 474756
Query 97121 AGCTCTGTCGGCGTCAGGGCGCTTGAGTCATCAATAAAAATATTCTGCTTGTCCAACAGA 97180
| || || ||||||||| || |||||||| ||| | || || | || || | |||
Sbjct 474757 ACTTCCGTTGGCGTCAGGCCGGACGAGTCATCGATATACATGTTACGTTTTTCGAGCAGG 474816
Query 97181 ATACCCATTGCGCCAGAAACCCGCGCCCAATCCTCGTCGTTAAGTTGCCCTGTTCGAATA 97240
|| ||||| | || |||| |||||||| || ||||| | ||| || || || || ||
Sbjct 474817 ATCCCCATGGTGCTGGAAATTCGCGCCCAGTCTTCGTCATCAAGCTGACCGGTACGGATT 474876
Query 97241 CGAGTCTGATCAACGCGTGCAAGAGAAGCCAGTGAGCGCATCATCAGCTGGTGGCTCGGC 97300
||||| || ||||| | ||| || ||||| |||||||| | ||||| || |||
Sbjct 474877 TTGGTCTGGTCGACGCGGGAAAGCGACGCCAGCATACGCATCATGATCTGGTCGCCGGGC 474936
Query 97301 ATCTCAAGGCTAAAAACCAATACGGGCTTATCGTTACGAACTGCGGCATTTTCGACGAGA 97360
|||||||| || || | || || || ||||| | | || ||||||||| ||||
Sbjct 474937 ATCTCAAGACTGAAGATTAAGACCGGTTTATCCTGCATCATCGCCGCATTTTCGGCGAGG 474996
Query 97361 TTCATCGCAAACGTGGTCTTCCCCATAGATGGGCGGGCGGCGACAATGATGAGATCGGAC 97420
||||| ||||||||||| || ||||| || || || || || || ||||| ||||| ||
Sbjct 474997 TTCATTGCAAACGTGGTTTTACCCATCGACGGACGTGCCGCCACGATGATCAGATCCGAT 475056
Query 97421 GACTGAAGCCCTGCCGTCTTCTTATTGAGATCGGTAAATCCGGTATCAAGTCCCGTTACA 97480
|| | || || || ||||||| |||||| | | | ||||| | || |||||
Sbjct 475057 TTTTGCAAACCGGCGGTTTTCTTATCGAGATCCGCATAGCCGGTGGACACACCGGTTACG 475116
Query 97481 CCATCATGCGGTCGCTGAAACAACTCTTCTATGCGAGATACCGTTGCATCGAGAATGCTG 97540
|| || ||||| ||||| |||| ||||| || || || || || || ||||| | |
Sbjct 475117 CCGTCGTGCGGGCGCTGGAACAGTTCTTCGATACGCGAAACGGTGCTTTCCAGAATACGG 475176
Query 97541 GCGATATCTTTTGGACCACTACCGCTCTTTTG--TCGTTTTTCAGCTATTTCAAAAACGC 97598
|||| ||| || | || | || | || || ||| || || | || ||||
Sbjct 475177 TCGATGCTTTTCGGGC--CTTCGTCTTTACTGGCGCGGGATTCGGCAATCTGGAATACGC 475234
Query 97599 GGCGTTCGGCCATATCCAGCAATTCATTGCTGCCCCGGCCATCCTGCGCATATCCAGCTT 97658
|| |||||| | ||||||| || | ||||| || || | | | |||| || || |
Sbjct 475235 GGGATTCGGCTAAGTCCAGCAGGTCTTCGCTGCTGCGCCCCTGCGGATCATAACCCGCAT 475294
Query 97659 CAGCTATTTCATTTGCGACGGAAATCATTTCACGAACAACCGCGCGTTCACGAACGATAT 97718
| || |||||||| ||||||||||||||||| ||||| || ||||||||||| ||||| |
Sbjct 475295 CGGCAATTTCATTGGCGACGGAAATCATTTCGCGAACGACTGCGCGTTCACGCACGATGT 475354
Query 97719 CCGCATAAGCACAAATATTTGCCGCGCTGGGCGTGTTCTTTGACATCTCCGCAAGGTACG 97778
| |||||||| | ||||| ||||| || || ||||| || || | ||| || || || |
Sbjct 475355 CGGCATAAGCGCCGATATTCGCCGCACTTGGGGTGTTTTTCGAGAGCTCTGCCAGATAGG 475414
Query 97779 CAAAACCACCGGCGCGTTCTAATTTACCGTTCTGTTCAAGTGCTTCAGCAAGTGTTATCA 97838
| ||||| ||| || || | || || |||||||| || | ||||| ||| || ||||
Sbjct 475415 CGAAACCGCCGACGGAATCCAGTTCGCCTTTCTGTTCCAGGGATTCAGAAAGCGTAATCA 475474
Query 97839 AATCAATCGGTTTGC-CATGACTTAATAACCTCTCCATCTCACTGAAAATTTCACGATGA 97897
|| |||||||||| ||| | | || | || ||| || ||||||| |||||
Sbjct 475475 GGTCGATCGGTTTGCTCATCTC-CAGCAAACGCTGCATTTCGGTGAAAATCAGGCGATGC 475533
Query 97898 GCATTGGTATAAAAATCATCAGCAACTATACGATCTGCCACTTCATCCCAGCGGCAGTTA 97957
| | | | || |||| || | ||| || || || | ||||||||| ||||
Sbjct 475534 GGGCGGCTGAAGAAGTCATTGCTGACCACACGCTCGGCGACGTTATCCCAGCGTTCGTTA 475593
Query 97958 TCAAGCATTAAGCCACCAAGTACAGCTTGTTCTGC 97992
|| ||||| | || || || || | |||||| ||
Sbjct 475594 TCCAGCATCAGCCCGCCCAGAACGGATTGTTCAGC 475628
Score = 179 bits (198), Expect = 2e-40
Identities = 246/343 (72%), Gaps = 3/343 (1%)
Strand=Plus/Plus
Query 44695 CGTCACGGCGAGCGCCGATCATTTGCATGGTGCCGCCCTGGCTGACGATAATTTCCGTCG 44754
|| |||||| |||||| ||| ||||||||||||||| | | |||| | ||| || |
Sbjct 459536 CGGCACGGC---CGCCGAGCATCTGCATGGTGCCGCCCACGTTAACGACGACTTCGGTGG 459592
Query 44755 TGTAACGTTCTACACCGGCGTCATCTGTCCACTTACGGGTTTTAAGTTTCCCTTCGATGT 44814
|||| ||| || || || | ||| ||||| |||||||||| ||| ||||||||||
Sbjct 459593 TGTATTTTTCAACGCCAGCCTGATCGGTCCATTTACGGGTTTGCAGTGCGCCTTCGATGT 459652
Query 44815 AGACCTGAGAACCTTTTCGTAAATACTCACTCGCAATTTCAGCAAGTTTTCCGAACAAAA 44874
|||||||||||||||| | || || | || | ||| || | ||| |||||||| |
Sbjct 459653 AGACCTGAGAACCTTTCTTCAGGTATTCGCCTGCGACTTCTGCTAATTTGCCGAACAACA 459712
Query 44875 CGACTTTATGCCATTCTGTTTGCTCTTTCTGTTGGCCCGTTTGCTTGTCGCGCCATGATT 44934
| || |||||||| |||| |||||||| | ||| || ||||| ||||| |
Sbjct 459713 CCACACGGTGCCATTCCGTTTTTTCTTTCTGCTCGCCGGTGGCTTTGTCACGCCAGCTCT 459772
Query 44935 CATTCGTTGCGATGCTGAGTCTTCCGACCGCTCCGCCATTTGGTATATACCTGATCTCCG 44994
|| |||||| | ||| | | ||||| ||||| || || || || | || ||||
Sbjct 459773 CAGACGTTGCCAGAGTGATGTTGGCAACCGCGCCGCCGTTAGGCATGTAGCGGACTTCCG 459832
Query 44995 GGTCTTGCCCCAGGGTACCAATCAGGATGACTTTGTTTACACC 45037
||||||| ||||| |||| | || || ||||||||||| ||
Sbjct 459833 GGTCTTGTCCCAGATTACCGACGAGAATAACTTTGTTTACGCC 459875
>seq6488
Length=277817
Score = 381 bits (422), Expect = 4e-101
Identities = 601/851 (71%), Gaps = 25/851 (3%)
Strand=Plus/Plus
Query 64267 CGAGCGACGGTTGTAATCTGTTGTCCATTTCCACCGCGCATTACTCCCGGTCATTCGCTG 64326
||| || ||||| ||| | || ||||||||| ||||| |||||||| | ||
Sbjct 208751 CGACCGCCGGTTATAAGCCGTGTGCCATTTCCAGTAAGCATTGCTCCCGGTACGCCTCTA 208810
Query 64327 ATTAGCCACTGCACGGTTACGGTCTGCATATTCACCGGGCCAGTAACCCGCACCTTTTCG 64386
| || || || | || | ||| ||||| || | |||||||||||||| |||
Sbjct 208811 CCTGGCTACCGCCTGATTTCTGTCCGCATACTCCGCCGGCCAGTAACCCGCCTAGGCTCG 208870
Query 64387 GGGCGGGATAAGCGCGCTGATTTTCTTACGCCGCAGTTCATCGTGACAGAGCCGGGTATC 64446
|||||||||||||| |||||||| || ||| ||| || | || || || || ||
Sbjct 208871 CGGCGGGATAAGCGCCCTGATTTTTTT--GCCACAGCTCGTGATGGCAAAGTTTTGTGTC 208928
Query 64447 GTAAGCTCCATCGGCGGCGGCTGACCTGATTTTC-CGGTGGGTTTGCCGGATTAACCCGG 64505
||||| |||||||| | || ||||| | || || ||||| || || || | || |
Sbjct 208929 ATAAGCGCCATCGGCAGAAGC-GACCTTAACTTGACGATGGGTCTGACGAATAAGTCCCG 208987
Query 64506 GGAAGGCCTCTGAGTCCGTAACGTTGTTCAGCGACAGGTCAGCGCAGATGATTTCATGTG 64565
| || |||||| ||| || || || ||||| ||||||||||||||||| | ||||| |
Sbjct 208988 GTAATGCCTCTACGTCAGTCACATTATTCAGGGACAGGTCAGCGCAGATAACCTCATGAG 209047
Query 64566 TTTTACTGTCAACTGCCAGATGCAGCTTACGCCATATACGACGGCGTTCCTGGCCATGCT 64625
| ||| || ||||| || || || ||||| | || || |||||| || || |
Sbjct 209048 TACCGGCGTCCACCGCCAGGTGAAGTTTCCGCCAGACGCGGCGCTTTTCCTGACCGTGTT 209107
Query 64626 TTTTGACTTTCCACTCGCCTTCACCGAAGACCTTCAGCCCGGTGGAATCAATTACCAGGT 64685
|||| || ||| ||||||||||||||||||| || | | |||||| || || || || |
Sbjct 209108 TTTTCACCTTCTACTCGCCTTCACCGAAGACTTTTAATCTGGTGGAGTCGATAACAAGAT 209167
Query 64686 GTGCGATTTCACCCCGGGTGGGCGTTTTGAAACTGATATTAACCGACTTTGCCCGCCTGC 64745
| || |||| ||| || | ||| ||||| || ||| | || |||| | || || |
Sbjct 209168 GGGCAATTT-ACCGCGCGCGGGAGTTTTAAACGGGATGTGGACGAACTTAGTCCACCAAC 209226
Query 64746 TGACACAGCTGTAATCCGGGCAGCGTAGCGGAACGTTCATCAGAGAAAAAATGGAATCAA 64805
|||| ||| ||||||||| || | ||||| | || ||||| | ||||||||||||||
Sbjct 209227 TGACGCAGGAGTAATCCGGACACCTGAGCGGGAGCTTTATCAGGGTAAAAATGGAATCAA 209286
Query 64806 TAAAGCCCTGCGCAGCGCGCAGGGTCAGCCTGAATACGCGTTTAATGACCAGCACAGTCG 64865
|||| |||||||| |||||||| || || | || ||||||| | | ||| || || |
Sbjct 209287 TAAATCCCTGCGCGGCGCGCAGCGTGAGGCGAAAAACGCGTTAGAGCATCAGTACCGTAG 209346
Query 64866 TGATGGCAAGGTCAGAATAGCGCTGAGGTCTGCCTCGTGAAGAAGGTGTTGCTGAC-TCA 64924
|| || || |||||||| ||||| || | || ||||||| | |||||| | |||
Sbjct 209347 AAATAGCGAGCTCAGAATAACGCTGCGGACGACCGCGTGAAG-ACGTGTTGGGCTCGTCA 209405
Query 64925 TACCAGGCCTGAATAGCTTCATCATCCAGCCAGAAAGTTATGGAGCCACGGTTGATGAGG 64984
|||||||||| ||| || ||||| |||||||| || | | ||||
Sbjct 209406 TACCAGGCCTTAATGGCCGACTCATCAAGCCAGAATGTCA-------------GTTGAGC 209452
Query 64985 GCTTTATTGTAGGTGGGCCAGTTGGTGATTTTGAACTTTTGCTTTGCCACG-GAACGGTC 65043
|| || | ||||| | ||||| ||||||||| ||||||| ||||||||| || |
Sbjct 209453 GCATTGTAGTAGGGAGCCCAGTGCGTGATTTTGTACTTTTGTTTTGCCACGTGATATCGC 209512
Query 65044 TGCGTTGTCGGGAAGATACGTGATCTGATCCTTCAACTCAG--CAAAAGTTCGATTTATT 65101
||| || || || |||||| ||||| | |||| | |||||||||||||||||
Sbjct 209513 TGCAGGATCAGG-AGCGTGGTGATCGGATCCCT-AACTACGGCCAAAAGTTCGATTTATT 209570
Query 65102 CAACAAAACCA 65112
||||||| |||
Sbjct 209571 CAACAAATCCA 209581
>seq9046
Length=37467
Score = 221 bits (244), Expect = 8e-53
Identities = 248/332 (75%), Gaps = 0/332 (0%)
Strand=Plus/Plus
Query 65148 GCCAGCACATCGCGGCGGCTCTCTGCGTTCTGTTGCGGCTGGGTAAAATAGGTCACCAGA 65207
|| |||||||| || ||| | ||| | | || ||| ||||| ||||| ||||||||
Sbjct 31023 GCGAGCACATCACGACGGGATTTTGCATCTTTTTCCGGTTGGGTGAAATACGTCACCAGC 31082
Query 65208 ACCAGCGGCGCACGACCCTGCGGCCAGATCACCGCAATATCATTGGTGGTGCCGTAGCCG 65267
||||||||||| | ||||||||||| || ||||||||||| |||||||| ||
Sbjct 31083 ACCAGCGGCGCTTTGTTTTCAGGCCAGATCACTGCGATATCATTGGTCGTGCCGTAATCG 31142
Query 65268 CCGCTGCCGGTCTTATCACCCACAGTCCACGACGTCGGTAAGCCGGCCCGAATGCTGGCT 65327
||||||||||| ||||| || ||| |||| | || |||||| || || || |||||
Sbjct 31143 CCGCTGCCGGTTTTATCGCCGACAATCCAGGTCGCCGGTAATCCTGCGCGGATGCTCATC 31202
Query 65328 GCGCCGGTCGTATTGCCTTTGAGCCACGTCACCAACTGCGCCCGCTGGGTTTCGCCCAGC 65387
|||||||| ||||| ||||| | ||| ||||| || || ||||| | ||| |||||
Sbjct 31203 GCGCCGGTGGTATTCCCTTTCATCCATTCCACCAGTTGTGCGCGCTGCGGTTCCGCCAGC 31262
Query 65388 GCATGACCCAGCGTAAGCTGACGCAACGTCTGCGCCATCGCCCGCGGCGTGGTGGTGTCT 65447
|| |||||||| || ||| || |||||||||| ||||| | ||||||||
Sbjct 31263 GCGGAGCCCAGCGTCGCGTGTTGCAGGCTCAGCGCCATCGCACGCGGTGACGTGGTGTCG 31322
Query 65448 CTCGGGTCGCCGGGAATGGCGGTATTCAGCGT 65479
| | ||||| ||||||||||||||||||||
Sbjct 31323 CGCTCATCGCCCGGAATGGCGGTATTCAGCGT 31354
>seq25848
Length=116905
Score = 102 bits (112), Expect = 5e-17
Identities = 232/344 (67%), Gaps = 4/344 (1%)
Strand=Plus/Minus
Query 44708 GCCGATCATTTGCATGGTGCCGCCCTGGCT-GACGATAATTTCCGTCGTGTAACGTTCTA 44766
||| | ||| ||||| |||||| || || ||| ||||||||| |||||||| || |
Sbjct 108321 GCCCAGCATCTGCATCGTGCCGTT-TGCCTTGACCGCAATTTCCGTGGTGTAACGGTCGA 108263
Query 44767 CACCG-GCGTCATCTGTCCACTTACGGGTTTTAAGTTTCCCTTCGATGTAGACCTGAGAA 44825
||| ||| |||| ||| || ||||| | || | |||||||||||||| | |
Sbjct 108262 TACCCTGCG-CATCCTGCCATTTGCGGGTCTGCAGCTGGCCTTCGATGTAGACTTTTGCG 108204
Query 44826 CCTTTTCGTAAATACTCACTCGCAATTTCAGCAAGTTTTCCGAACAAAACGACTTTATGC 44885
|| || | || |||| |||||||| || || |||||||||| || || |||
Sbjct 108203 CCCTTGGTCAGGTATTCACCGGCAATTTCGGCCAGCTTTCCGAACACGACCACGCGGTGC 108144
Query 44886 CATTCTGTTTGCTCTTTCTGTTGGCCCGTTTGCTTGTCGCGCCATGATTCATTCGTTGCG 44945
|| || |||| || ||| | ||| || ||||| ||||| ||| ||| ||
Sbjct 108143 CACTCGGTTTTTTCGCGCTGCTCGCCGGTGGCTTTGTCACGCCAGTTTTCGGACGTGGCC 108084
Query 44946 ATGCTGAGTCTTCCGACCGCTCCGCCATTTGGTATATACCTGATCTCCGGGTCTTGCCCC 45005
| | || || | ||||| ||||| || || || || | | |||||| | || ||
Sbjct 108083 AGCGTCAGGCTCGCCACCGCGCCGCCGTTCGGCATGTAGCGCAGCTCCGGTGCCTGACCT 108024
Query 45006 AGGGTACCAATCAGGATGACTTTGTTTACACCGCGTTGTGCCAT 45049
| |||| | | |||||||||||| | || |||| ||||||
Sbjct 108023 AAATTACCCACGATGATGACTTTGTTAATTCCACGTTCTGCCAT 107980
>seq785
Length=396209
Score = 96.9 bits (106), Expect = 2e-15
Identities = 72/83 (87%), Gaps = 1/83 (1%)
Strand=Plus/Plus
Query 98311 AAATATGGTGGCCCCTACCGGACTTGAACCGGTGACCGTGCGATTATGAGTCGCCAGCTC 98370
|||| ||||||||| | | ||||||||||| | |||| ||||||||||||||| ||||
Sbjct 187890 AAATTTGGTGGCCCTTGCTGGACTTGAACCAGCGACCAAGCGATTATGAGTCGCGTGCTC 187949
Query 98371 TAACC-ACTGAGCTAAAGGGCCG 98392
||||| |||||||||||||||||
Sbjct 187950 TAACCAACTGAGCTAAAGGGCCG 187972
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 330621603904444
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