Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq4062 154 3e-32 seq48539 143 6e-29 seq8521 138 3e-27 seq15643 136 9e-27 seq8056 116 9e-21 >seq4062 Length=67394 Score = 154 bits (170), Expect = 3e-32 Identities = 165/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 || || || || || || || || ||||| || ||||||||||| || | | || || Sbjct 48381 AGCCTCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGTGTCCTG 48322 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 |||||||| || || ||||||||||| |||||||||||||| | | |||||||||| Sbjct 48321 CCATCTTCCAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCTGGGGGGATTCCTTCC 48262 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || ||||| || || |||||| || | | |||| ||| ||| || || || || Sbjct 48261 TTATCTTGGATCTTGGCCTTGACATGTTCGATGGTGTCAGAAGGCTCCACCTCGAGGGTG 48202 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| ||||||||||| ||||||||||||| |||||| Sbjct 48201 ATAGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCAT 48164 >seq48539 Length=7100 Score = 143 bits (158), Expect = 6e-29 Identities = 162/215 (75%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| | ||||| ||||| ||||||||||| ||||| |||| | || | ||||| Sbjct 6699 GAGGACCAAGTGAAGGGTAGATTCTTTTTGGATATTGTAGTCGGAAAGGGTGCGTCCATC 6640 Query 151952 TTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTT 152009 || | ||||| || |||||||| | ||||||||| || | | |||||||||||| Sbjct 6639 CTCCAACTGCTTT--CCTGCGAAGATCAACCTCTGCTGATCTGGAGGGATTCCTTCCTTG 6582 Query 152010 TCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATA 152069 ||||| || || ||||||| | || | |||| ||| ||| ||||| ||||||||| Sbjct 6581 TCTTGGATCTTGGCTTTGACATTTTCAATTGTGTCAGAAGGCTCAACTTCTAGAGTAATA 6522 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || || ||||| ||||||| |||||| Sbjct 6521 GTCTTTCCGGTAAGGGTCTTTACGAAGATCTGCAT 6487 Score = 105 bits (116), Expect = 2e-17 Identities = 154/216 (71%), Gaps = 4/216 (2%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| | ||||| || ||||| ||||| |||||||| || | | || | ||||| Sbjct 6927 GAGGACCAAGTGAAGGGTTGACTCCTTTTGAATGTTGTAGTCCGAAAGGGTACGTCCATC 6868 Query 151952 TTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTT 152009 ||| | ||||| || || ||||| | ||||||||| || | | ||||||||||| Sbjct 6867 TTCCAATTGCTTT--CCTGCAAAGATCAACCTCTGCTGATCTGGGGGAATTCCTTCCTTG 6810 Query 152010 TCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATA 152069 |||||||| || || ||| | || | | | ||||| || ||||| | || || Sbjct 6809 TCTTGAATCTTAGCCTTAACATTTTCAATGGTATCTGAGGGTTCAACTTCCAAGGTGATG 6750 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 |||||||| || || ||||| || || | ||||||| Sbjct 6749 GTTTTGCCAGTAAGGGTCTTGACAAAAATCTGCATT 6714 Score = 98.7 bits (108), Expect = 2e-15 Identities = 155/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || | || || || || || |||||||| |||||||||| | |||| Sbjct 6477 GAGACGGAGCACCAAGTGGAGGGTGGATTCCTTTTGGATATTGTAATCGGAGAGGGTTCG 6418 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || ||||| | || || ||||| || ||||||||||| || | | ||| ||||| Sbjct 6417 GCCGTCTTCCAACTGCTTGCCAGCGAAAATCAGCCTCTGCTGATCTGGAGGGATACCTTC 6358 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 || |||||||||||| || || | || | | || ||| ||| || || | ||| Sbjct 6357 TTTGTCTTGAATTTTTGCCTTCACGTTTTCAATCGTATCGGAAGGCTCCACCTCCAAAGT 6298 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || ||||| || | || |||||||| | |||||| || Sbjct 6297 TATCGTCTTGCCAGTCAAGGTTTTCACGAAAATCTGCATGTT 6256 >seq8521 Length=40141 Score = 138 bits (152), Expect = 3e-27 Identities = 160/214 (75%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||||||||| || || ||||| || ||||||||||| |||| | ||| | |||||| Sbjct 2458 AGGACAAGATGGAGTGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCT 2399 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 || || ||||| ||||| ||||| | ||||||||| || | | ||| |||||||| | Sbjct 2398 TCAAGCTGCTTT--CCGGCAAAGATCAACCTCTGCTGATCTGGGGGGATACCTTCCTTGT 2341 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070 | || ||||| |||||| |||| | ||||| || || || || || ||||| | Sbjct 2340 CCTGGATTTTGGCCTTGACATTCTCAATACTGTCCGAGGGTTCAACCTCCAGTGTAATGG 2281 Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | ||||| || | |||||| || |||| |||||| Sbjct 2280 TCTTGCCGGTCAAAGTCTTGACAAAGATCTGCAT 2247 Score = 138 bits (152), Expect = 3e-27 Identities = 160/214 (75%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| ||||| || ||||||||||| ||||||||||| || | | || | |||||| Sbjct 2686 AGGACGAGATGGAGTGTAGACTCTTTCTGGATGTTGTAGTCAGAAAGGGTACGTCCATCT 2627 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 || || ||||| ||||||||||| | ||||||||| || | | || |||||||| | Sbjct 2626 TCCAGCTGCTTT--CCGGCGAAGATCAACCTCTGCTGATCTGGGGGAATACCTTCCTTGT 2569 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070 |||| || || || ||| |||||| | |||| || ||| || || || || || | Sbjct 2568 CTTGGATCTTGGCCTTAACATTCTCTATGGTGTCGGAGGGCTCAACCTCGAGGGTGATTG 2509 Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || || || |||||||| ||||||| |||||| Sbjct 2508 TCTTCCCAGTCAGAGTCTTGACGAAGATCTGCAT 2475 Score = 118 bits (130), Expect = 2e-21 Identities = 160/221 (72%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| | |||||||| ||||| || || ||||| || || | | || | Sbjct 2237 GAGACGGAGGACCAAGTGAAGAGTGGACTCCTTCTGAATGTTATAGTCAGAGAGGGTACG 2178 Query 151946 CCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 |||||||| || ||||| ||||||||||| | ||||||||| || | | ||| ||| Sbjct 2177 TCCATCTTCCAGCTGCTTT--CCGGCGAAGATCAACCTCTGCTGATCTGGGGGGATACCT 2120 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 ||||| || || || || ||| ||| |||| | |||| || ||| || || || Sbjct 2119 TCCTTATCCTGGATCTTGGCTTTCACATTCTCAATTGTGTCAGAGGGCTCAACCTCTAGG 2060 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || ||||| || || ||||||||||| | |||||| Sbjct 2059 GTGATTGTCTTGCCGGTAAGGGTCTTCACGAAAATCTGCAT 2019 Score = 113 bits (124), Expect = 1e-19 Identities = 155/215 (72%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| | ||||| || |||||||||||||||||||| |||| | || | ||||| Sbjct 2915 GAGGACCAAGTGAAGGGTCGACTCTTTTTGGATGTTGTAGTCGGAAAGGGTACGTCCATC 2856 Query 151952 TTCTA--GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTT 152009 ||| | ||||| || || ||||| | ||||||||| || | | ||| |||||||| Sbjct 2855 TTCCAATTGCTTT--CCTGCAAAGATCAACCTCTGCTGATCTGGGGGGATACCTTCCTTA 2798 Query 152010 TCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATA 152069 || || || || ||| ||| |||| | ||||||| ||| || || || || || Sbjct 2797 TCCTGGATCTTGGCTTTCACATTCTCAATTGTGTCTGAGGGCTCAACCTCTAGGGTGATG 2738 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || || || || || |||| |||||| Sbjct 2737 GTCTTCCCGGTCAGGGTTTTGACAAAGATCTGCAT 2703 >seq15643 Length=27379 Score = 136 bits (150), Expect = 9e-27 Identities = 162/220 (74%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||||| || || | ||||| || ||||| || ||||| |||||||| | | || | Sbjct 12265 GAGTCGAAGCACTAAGTGAAGTGTGGACTCCTTCTGGATATTGTAATCTGAAAGGGTACG 12206 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || || ||| ||||||||||| | ||||||||| || | | ||||||||| Sbjct 12205 TCCATCCTCGAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGATCTGGAGGGATTCCTTC 12146 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 || ||||| || || ||||||| | || | |||| || |||||| ||||| || Sbjct 12145 TTTGTCTTGGATCTTGGCTTTGACATTTTCGATAGTGTCAGAGGGCTCTACCTCAAGGGT 12086 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || ||||| ||||| || ||||||||||| | ||||||| Sbjct 12085 GATGGTTTTCCCCGTAAGGGTCTTCACGAAAATCTGCATT 12046 >seq8056 Length=34938 Score = 116 bits (128), Expect = 9e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955 ||||||||||| ||||| ||||| || |||||||| |||| | || | |||||||| Sbjct 32339 ACAAGATGAAGGGTAGATTCTTTCTGAATGTTGTAGTCGGAGAGGGTACGTCCATCTTCC 32280 Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015 || || || ||||| || | ||||||||| || | | ||| |||||||| |||||| Sbjct 32279 AGCTGCTTGCCAGCGAAAATCAACCTCTGCTGATCTGGGGGGATGCCTTCCTTATCTTGA 32220 Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075 ||||| ||||| | || | | ||||| || || || || || || || ||| Sbjct 32219 ATTTTGGCCTTGACGTTTTCAATAGTATCTGAGGGTTCGACCTCCAGGGTGATTGTCTTG 32160 Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || | ||||| ||||||| |||||| Sbjct 32159 CCAGTTAATGTCTTGACGAAGATCTGCAT 32131 Score = 102 bits (112), Expect = 2e-16 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || | ||| || || ||||| || ||||| |||||||||| | || | Sbjct 32121 GAGACGGAGCACCAAATGGAGGGTCGACTCCTTCTGGATATTGTAATCGGAAAGGGTGCG 32062 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 |||||||||| ||| || ||||||||||| | || || |||| | |||||||| Sbjct 32061 ACCATCTTCTAATTGTTTTCCAGCGAAGATAAGACGTTGTTGATCCGGAGGAATTCCTTC 32002 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 || ||||||||||| || ||| | || | | ||||| ||| || || | || Sbjct 32001 TTTGTCTTGAATTTTCGCCTTTACATTTTCGATCGTATCTGAGGGCTCAACCTCCAATGT 31942 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || || | ||| |||||||| | |||||| Sbjct 31941 GATCGTCTTTCCGGTCAAAGTTTTCACGAAAATCTGCAT 31903 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1152803204331614