Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_031924.1 Length=47564 Score E Sequences producing significant alignments: (Bits) Value seq223 122 3e-23 >seq223 Length=511576 Score = 122 bits (134), Expect = 3e-23 Identities = 234/338 (69%), Gaps = 9/338 (3%) Strand=Plus/Plus Query 36441 CCACCAAGCATCTGCATCACGCCGCCCATCTGCGGAATGACAATCTCTGTGGTGTATCTG 36500 || || ||||||||||| |||||||| | || ||| | || ||||||||| | Sbjct 459544 CCGCCGAGCATCTGCATGGTGCCGCCCACGTT---AACGACGACTTCGGTGGTGTATTTT 459600 Query 36501 TCTATTCCGTTGCTG-TCAGTCCATTTACGAGTACGAAGCTGGCCTTCGATGTAAACCTG 36559 || | || ||| || ||||||||||| || | || |||||||||||| ||||| Sbjct 459601 TCAACGCCAGC-CTGATCGGTCCATTTACGGGTTTGCAGTGCGCCTTCGATGTAGACCTG 459659 Query 36560 CGAACCTTTTCGAAGGTATTCTCCTGCAACTTCCGCAAGTTTCCCGAATATGACAATACG 36619 |||||||| |||||||| ||||| ||||| || | ||| ||||| | || | ||| Sbjct 459660 AGAACCTTTCTTCAGGTATTCGCCTGCGACTTCTGCTAATTTGCCGAACAACACCACACG 459719 Query 36620 ATGCCACTCTGTCTGTTCTTTCTTTTCTCCTGTCTGCTTATCTTTCCACTGCTCAGATGT 36679 ||||| || || | |||||||| || || || || || ||| |||||| || Sbjct 459720 GTGCCATTCCGTTTTTTCTTTCTGCTCGCCGGTGGCTTTGTCACGCCAGCTCTCAGACGT 459779 Query 36680 TGCAACGGAAATGTTGACAATTGCAGAACC-TGATGC-TGAATATTTAACTTCAGGGTCG 36737 ||| | | |||||| ||| || || | | || || || ||||| ||||| Sbjct 459780 TGCCAGAGTGATGTTGGCAACCGCGCCGCCGTTAGGCATG--TAGCGGACTTCCGGGTCT 459837 Query 36738 TTTCCGAGAGTTCCGACAATAATTACTTTATTTACGCC 36775 | ||| ||| | ||||| | ||| ||||| |||||||| Sbjct 459838 TGTCCCAGATTACCGACGAGAATAACTTTGTTTACGCC 459875 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151958886622008